RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GRAMD4Q6IC98 578 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 MBOAT4Q96T53 435 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 THUMPD3Q9BV44 507 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 CLPBQ9H078 707 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 IKZF5Q9H5V7 419 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 RC3H2Q9HBD1 1191 aaKnown RBP12.25□□□□□ -0.45
RNF4-222ENST00000541204 IL26Q9NPH9 171 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 ADGRE2Q9UHX3 823 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 UNC80Q8N2C7 3258 aa12.25□□□□□ -0.45
RNF4-222ENST00000541204 GNGT2O14610 69 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 PRMT5O14744 637 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 CXCL14O95715 111 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 AGXTP21549 392 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GSTM2P28161 218 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 PIK3CGP48736 1102 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CLCN7P51798 805 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TUBA3CQ13748 450 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SKIV2LQ15477 1246 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 ZNF783Q6ZMS7 281 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 RFLNAQ6ZTI6 216 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 KCNJ9Q92806 393 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 AURKBQ96GD4 344 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SLC46A2Q9BY10 475 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 UGT2B28Q9BY64 529 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 ARMC7Q9H6L4 198 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GPN2Q9H9Y4 310 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 SELENONQ9NZV5 590 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 ST14Q9Y5Y6 855 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 DGKBQ9Y6T7 804 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CFAP99D6REC4 459 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 LEFTY2O00292 366 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CLPXO76031 633 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 ESR1P03372 595 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SLC2A4P14672 509 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 PORP16435 677 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 PRKACGP22612 351 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CCR2P41597 374 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 AP1S1P61966 158 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 RPL38P63173 70 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 ITGADQ13349 1161 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GTF2H2Q13888 395 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SPCS2Q15005 226 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 PLEKHG6Q3KR16 790 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 C6orf141Q5SZD1 244 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TTC23Q5W5X9 447 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GTF2H2CQ6P1K8 395 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 PRR23BQ6ZRT6 265 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 ZBTB8BQ8NAP8 495 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 CHDHQ8NE62 594 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 OR8J3Q8NGG0 315 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TRUB1Q8WWH5 349 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 HDAC2Q92769 488 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 SLC47A1Q96FL8 570 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 OSBPL10Q9BXB5 764 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 MAGEE1Q9HCI5 957 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 PDE10AQ9Y233 779 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 DOCK6Q96HP0 2047 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 ANAPC1Q9H1A4 1944 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 NPIPB15A6NHN6 443 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 GAPDHSO14556 408 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 XYLBO75191 536 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SLC25A14O95258 325 aaPredicted RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 OLFM2O95897 454 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TRBC1P01850 177 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 BPIP17213 487 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GGT5P36269 586 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GDF5P43026 501 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 RELAQ04206 551 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 KCNAB2Q13303 367 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 KIAA0040Q15053 153 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CHRNA6Q15825 494 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SPESP1Q6UW49 350 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 NECAB2Q7Z6G3 386 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 ZNF555Q8NEP9 628 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 SLC13A3Q8WWT9 602 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TCEAL4Q96EI5 215 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CCDC138Q96M89 665 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 P2RY12Q9H244 342 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 NSUN3Q9H649 340 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 IPPKQ9H8X2 491 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 GORASP2Q9H8Y8 452 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 EXD2Q9NVH0 621 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TMEM45AQ9NWC5 275 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 DNMT3BQ9UBC3 853 aaKnown RBP12.24□□□□□ -0.45
RNF4-222ENST00000541204 DNAJB9Q9UBS3 223 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 CRLS1Q9UJA2 301 aa12.24□□□□□ -0.45
RNF4-222ENST00000541204 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 PTGES3LE9PB15 166 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 FFAR3O14843 346 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 GPR42O15529 346 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms