RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CD274Q9NZQ7 290 aa18.4■□□□□ 0.54
TNFRSF1A-213ENST00000540022 A8MT66 165 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 YKT6O15498 198 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KLK8O60259 260 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NOBOXO60393 691 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 RPN2P04844 631 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TPBGLP0DKB5 382 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MYL2P10916 166 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 SLC2A4P14672 509 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 XRCC1P18887 633 aaPredicted RBP18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TAC1P20366 129 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 KCNA4P22459 653 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 AP1S2P56377 157 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CDKL1Q00532 357 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HHATQ5VTY9 493 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 OGFOD3Q6PK18 319 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 RAD51AP1Q96B01 352 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 CXorf40BQ96DE9 158 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 NRTNQ99748 197 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MVB12BQ9H7P6 319 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 MID2Q9UJV3 735 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 PLAGL1Q9UM63 463 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TDRKHQ9Y2W6 561 aaKnown RBP18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 HEBP2Q9Y5Z4 205 aa18.39■□□□□ 0.54
TNFRSF1A-213ENST00000540022 TP53BP1Q12888 1972 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 WDR91A4D1P6 747 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 MYO1CO00159 1063 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SMIM24O75264 130 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 BPGMP07738 259 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ANXA5P08758 320 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 GFAPP14136 432 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ATP5F1P24539 256 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ALDH3A1P30838 453 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 UBE2IP63279 158 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 KRT33BQ14525 404 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PFKFB4Q16877 469 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 C18orf21Q32NC0 220 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 FBXO48Q5FWF7 155 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TTC23LQ6PF05 361 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 C17orf82Q86X59 251 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 C10orf107Q8IVU9 208 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PDPRQ8NCN5 879 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 OR9A1PQ8NGU1 263 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 MAGEC3Q8TD91 643 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 RHBDF1Q96CC6 855 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PHF21BQ96EK2 531 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 CAMK1GQ96NX5 476 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 EGFL8Q99944 293 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 INTS9Q9NV88 658 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SIRPGQ9P1W8 387 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 CPNE7Q9UBL6 633 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 COLEC10Q9Y6Z7 277 aa18.39■□□□□ 0.53
TNFRSF1A-213ENST00000540022 CABIN1Q9Y6J0 2220 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PABPN1LA6NDY0 278 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 NDUFS1P28331 727 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ATXN3P54252 364 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 MAZP56270 477 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ZXDCQ2QGD7 858 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 CDKL4Q5MAI5 379 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 C6orf132Q5T0Z8 1188 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 FBXO39Q8N4B4 442 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PTGR2Q8N8N7 351 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 GPR156Q8NFN8 814 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 MAPK15Q8TD08 544 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ESAMQ96AP7 390 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 CCDC138Q96M89 665 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 MENTQ9BUN1 341 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SLC40A1Q9NP59 571 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 POT1Q9NUX5 634 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 OXSMQ9NWU1 459 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 NCKIPSDQ9NZQ3 722 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 POLG2Q9UHN1 485 aa18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PTBP2Q9UKA9 531 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TMEM131Q92545 1883 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 C4orf47A7E2U8 309 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TAPBPO15533 448 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 IPO13O94829 963 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SLC16A8O95907 504 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 VIPP01282 170 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 S100BP04271 92 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 NFKB2Q00653 900 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SULT1C3Q6IMI6 304 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SLC9B2Q86UD5 537 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TRIM48Q8IWZ4 208 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 ARL14Q8N4G2 192 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 LMNTD1Q8N9Z9 388 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 OR52E1Q8NGJ3 308 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 FBXL8Q96CD0 374 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 IL17FQ96PD4 163 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TMEM79Q9BSE2 394 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 KIR3DX1Q9H7L2 352 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 NLGN3Q9NZ94 848 aa18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 STOX2Q9P2F5 926 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-213ENST00000540022 LRRC14BA6NHZ5 514 aa18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 TRIM38O00635 465 aa18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 BIRC5O15392 142 aa18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 PCDHGA12O60330 932 aa18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 SIX3O95343 332 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 IMPA1P29218 277 aa18.36■□□□□ 0.53
TNFRSF1A-213ENST00000540022 AGTR2P50052 363 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms