RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ANKRD61A6NGH8 418 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 PIGNO95427 931 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 IGHV2-70P01814 119 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 IGHV4-38-2P0DP08 117 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 SAGP10523 405 aaPredicted RBP6.12□□□□□ -1.43
TRAV11-201ENST00000539512 LGALS3BPQ08380 585 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 ODF4Q2M2E3 257 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 HYAL4Q2M3T9 481 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 SYT14P1Q58G82 188 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 CEACAM20Q6UY09 585 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 NUDT13Q86X67 352 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 NPEPL1Q8NDH3 523 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 FER1L6-AS2Q96M78 137 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 PELI2Q9HAT8 420 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 ZCCHC17Q9NP64 241 aaKnown RBP6.12□□□□□ -1.43
TRAV11-201ENST00000539512 ACAD8Q9UKU7 415 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 MTUS1Q9ULD2 1270 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 RNF150Q9ULK6 438 aa6.12□□□□□ -1.43
TRAV11-201ENST00000539512 FLT1P17948 1338 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 A0A1W2PN81 502 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 A0A1W2PPQ1 181 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 IFITM10A6NMD0 228 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 SMIM18P0DKX4 95 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 LIFP15018 202 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 NR1D1P20393 614 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 TCEA1P23193 301 aaKnown RBP6.11□□□□□ -1.43
TRAV11-201ENST00000539512 JAK1P23458 1154 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 MPZP25189 248 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 AZGP1P25311 298 aaKnown RBP6.11□□□□□ -1.43
TRAV11-201ENST00000539512 CHRNA7P36544 502 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 LHX1P48742 406 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 LIMK1P53667 647 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 KCNJ10P78508 379 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 MZT1Q08AG7 82 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 TFCP2Q12800 502 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 HNRNPA0Q13151 305 aaKnown RBP6.11□□□□□ -1.43
TRAV11-201ENST00000539512 WDR38Q5JTN6 314 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 C11orf57Q6ZUT1 292 aaPredicted RBP6.11□□□□□ -1.43
TRAV11-201ENST00000539512 NUP54Q7Z3B4 507 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 METTL23Q86XA0 190 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 TMEM139Q8IV31 216 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 FGFBP3Q8TAT2 258 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 HSD17B8Q92506 261 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 CPNE1Q99829 537 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 ARRDC1-AS1Q9H2J1 176 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 CDH20Q9HBT6 801 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 XAB2Q9HCS7 855 aaKnown RBP6.11□□□□□ -1.43
TRAV11-201ENST00000539512 A4GALTQ9NPC4 353 aa6.11□□□□□ -1.43
TRAV11-201ENST00000539512 PCDH11YQ9BZA8 1340 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 FEZF1A0PJY2 475 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 DNM1LO00429 736 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 WDR46O15213 610 aaKnown RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 ACSL3O95573 720 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 HAPLN1P10915 354 aaPredicted RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 HSPA8P11142 646 aaKnown RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 SCG2P13521 617 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 IRF2P14316 349 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 CAPZA1P52907 286 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 MCMDC2Q4G0Z9 681 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 FAM47EQ6ZV65 393 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 CCAR2Q8N163 923 aaKnown RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 CIARTQ8N365 385 aaPredicted RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 THAP8Q8NA92 274 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 KLHDC9Q8NEP7 349 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 OR10V1Q8NGI7 309 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 GRAPLQ8TC17 118 aaPredicted RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 EXT2Q93063 718 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 FEVQ99581 238 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 GTPBP2Q9BX10 602 aaKnown RBP6.1□□□□□ -1.43
TRAV11-201ENST00000539512 Q9N2K0 584 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 LRWD1Q9UFC0 647 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 DAPK2Q9UIK4 370 aa6.1□□□□□ -1.43
TRAV11-201ENST00000539512 CD22P20273 847 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 EFNA1P20827 205 aaPredicted RBP6.09□□□□□ -1.43
TRAV11-201ENST00000539512 NPY4RP50391 375 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 PPIGQ13427 754 aaKnown RBP eCLIP6.09□□□□□ -1.43
TRAV11-201ENST00000539512 KLHL22Q53GT1 634 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 DCAF10Q5QP82 559 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 IL27RAQ6UWB1 636 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
TRAV11-201ENST00000539512 SPATA21Q7Z572 469 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 SMIM29Q86T20 159 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 MUS81Q96NY9 551 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 LRRC3BQ96PB8 259 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 MGME1Q9BQP7 344 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 FAM129AQ9BZQ8 928 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 FN3KQ9H479 309 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 ADPRHL2Q9NX46 363 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 FLRT3Q9NZU0 649 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.09□□□□□ -1.43
TRAV11-201ENST00000539512 TXNDC16Q9P2K2 825 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 TCF19Q9Y242 345 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 TMED3Q9Y3Q3 217 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 LRP12Q9Y561 859 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 LIPGQ9Y5X9 500 aa6.09□□□□□ -1.43
TRAV11-201ENST00000539512 LOC101059948A0A1B0GTJ6 334 aa6.08□□□□□ -1.44
TRAV11-201ENST00000539512 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
TRAV11-201ENST00000539512 PTGESO14684 152 aa6.08□□□□□ -1.44
TRAV11-201ENST00000539512 AP5Z1O43299 807 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms