RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PLAGL1Q9UM63 463 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 TDRKHQ9Y2W6 561 aaKnown RBP12.07□□□□□ -0.48
VAMP1-206ENST00000538970 CSMD1Q96PZ7 3565 aa12.07□□□□□ -0.48
VAMP1-206ENST00000538970 CELSR2Q9HCU4 2923 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 A0A0U1RQJ8 604 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 HEATR9A2RTY3 570 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 ERI2A8K979 691 aaKnown RBP12.06□□□□□ -0.48
VAMP1-206ENST00000538970 OR1I1O60431 355 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 AGFG2O95081 481 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 COL8A1P27658 744 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 PKLRP30613 574 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 FOLR3P41439 243 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 RAPSNQ13702 412 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 KIR2DS3Q14952 304 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 SLC5A12Q1EHB4 618 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 VWA5B1Q5TIE3 1220 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 MLIPQ5VWP3 458 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 LYPLAL1Q5VWZ2 237 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 AFTPHQ6ULP2 937 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 DNAJC22Q8N4W6 341 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 DNAAF3Q8N9W5 541 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 PNPLA2Q96AD5 504 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 SGSM3Q96HU1 749 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 HES6Q96HZ4 224 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 IP6K3Q96PC2 410 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
VAMP1-206ENST00000538970 DHCR7Q9UBM7 475 aaKnown RBP12.06□□□□□ -0.48
VAMP1-206ENST00000538970 SLC2A6Q9UGQ3 507 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 RIMKLBQ9ULI2 386 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 DOPEY1Q5JWR5 2465 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
VAMP1-206ENST00000538970 ISM1B1AKI9 464 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 TCP11X1B4DZS4 312 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 KDM1AO60341 852 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 CNOT3O75175 753 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SUN1O94901 812 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 GOT2P00505 430 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 CCR7P32248 378 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 GRIA1P42261 906 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 GCGRP47871 477 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 RAB28P51157 221 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 DCDP81605 110 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 ACVR1Q04771 509 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 KIF5AQ12840 1032 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SSPNQ14714 243 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SLC9A5Q14940 896 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 DCAF10Q5QP82 559 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 TSTD2Q5T7W7 516 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 MRPL14Q6P1L8 145 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 TLDC1Q6P9B6 456 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 ZNF534Q76KX8 674 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SLC22A15Q8IZD6 547 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 ZNF655Q8N720 491 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 OR2Y1Q8NGV0 311 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 LKAAEAR1Q8TD35 194 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 HDAC10Q969S8 669 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 ZNF778Q96MU6 729 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 RANBP9Q96S59 729 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 DESI2Q9BSY9 194 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 AP1M1Q9BXS5 423 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 ETNK1Q9HBU6 452 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SLAMF7Q9NQ25 335 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 TXLNGQ9NUQ3 528 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 C5AR2Q9P296 337 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 IFT80Q9P2H3 777 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 IMPACTQ9P2X3 320 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 NDOR1Q9UHB4 597 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 GPN3Q9UHW5 284 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 PLCL2Q9UPR0 1127 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 CDYLQ9Y232 598 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 CAPN6Q9Y6Q1 641 aa12.05□□□□□ -0.48
VAMP1-206ENST00000538970 SPTBN1Q01082 2364 aaKnown RBP12.05□□□□□ -0.48
VAMP1-206ENST00000538970 MED13Q9UHV7 2174 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 LIASO43766 372 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 SEMA7AO75326 666 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 GAS8O95995 478 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 CD63P08962 238 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 MAGP20916 626 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 ADRA1DP25100 572 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 STIP1P31948 543 aaKnown RBP12.04□□□□□ -0.48
VAMP1-206ENST00000538970 FDFT1P37268 417 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 CSE1LP55060 971 aaKnown RBP12.04□□□□□ -0.48
VAMP1-206ENST00000538970 RIPPLY3P57055 190 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 FOXL2P58012 376 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 GRB7Q14451 532 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 SEMA3AQ14563 771 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 KYNUQ16719 465 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 NKAIN1Q4KMZ8 207 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 PPP1R21Q6ZMI0 780 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 VRK3Q8IV63 474 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 TMEM151BQ8IW70 566 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 FAM20CQ8IXL6 584 aa12.04□□□□□ -0.48
VAMP1-206ENST00000538970 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms