RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.21
CD4-208ENST00000538827 INSM2Q96T92 566 aaPredicted RBP13.77□□□□□ -0.21
CD4-208ENST00000538827 PKP4Q99569 1192 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
CD4-208ENST00000538827 FSCN3Q9NQT6 498 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 ABCF3Q9NUQ8 709 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 TMEM74BQ9NUR3 256 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 TAAR2Q9P1P5 351 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 SPASTQ9UBP0 616 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 ASPMQ8IZT6 3477 aa13.77□□□□□ -0.21
CD4-208ENST00000538827 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 PRR19A6NJB7 356 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 STX16-NPEPL1H3BU86 382 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 STX16O14662 325 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 CCNT2O60583 730 aaKnown RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 SUPT7LO94864 414 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 HSPA4LO95757 839 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 EML2O95834 649 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 RETP07949 1114 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 DPP6P42658 865 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 CTSKP43235 329 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 NAGLUP54802 743 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 AP1S2P56377 157 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 DNAJB13P59910 316 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 HNRNPKP61978 463 aaKnown RBP eCLIP13.76□□□□□ -0.21
CD4-208ENST00000538827 CDKL1Q00532 357 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 PRKG2Q13237 762 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 TSTA3Q13630 321 aaPredicted RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 RCN2Q14257 317 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 ELOCQ15369 112 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 RPE65Q16518 533 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 ZNF678Q5SXM1 525 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 SULT1C3Q6IMI6 304 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 CAPRIN2Q6IMN6 1127 aaKnown RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 RPS27LQ71UM5 84 aaKnown RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 TCAIMQ8N3R3 496 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 MAGEC3Q8TD91 643 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 GPBAR1Q8TDU6 330 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 MOCOSQ96EN8 888 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 TMEM79Q9BSE2 394 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 FAM107BQ9H098 131 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 RABEP2Q9H5N1 569 aa13.76□□□□□ -0.21
CD4-208ENST00000538827 SCHIP1Q9P0W5 487 aaPredicted RBP13.76□□□□□ -0.21
CD4-208ENST00000538827 PI4KAP42356 2102 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 ARHGEF17Q96PE2 2063 aaPredicted RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 TMEM114B3SHH9 223 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 AQP9O43315 295 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 KLK8O60259 260 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 F3P13726 295 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 SLC2A4P14672 509 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 TSPAN8P19075 237 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 GRK2P25098 689 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 CCR10P46092 362 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 SLC1A6P48664 564 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 ABCE1P61221 599 aaKnown RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 HERVK_113P63132 956 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 RBBP7Q16576 425 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 DUOXA1Q1HG43 343 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 UNC50Q53HI1 259 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 CES4AQ5XG92 561 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 RABEPKQ7Z6M1 372 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 TBC1D21Q8IYX1 336 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 SNX31Q8N9S9 440 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 ZNF548Q8NEK5 533 aaPredicted RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 OR9A1PQ8NGU1 263 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 OR5K2Q8NHB8 316 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 RHBDF1Q96CC6 855 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 FBXL8Q96CD0 374 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 L3HYPDHQ96EM0 354 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 MED8Q96G25 268 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 IL17FQ96PD4 163 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 ERVK-6Q9BXR3 956 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 SHCBP1LQ9BZQ2 653 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 NSRP1Q9H0G5 558 aaKnown RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 STOX2Q9P2F5 926 aaPredicted RBP13.75□□□□□ -0.21
CD4-208ENST00000538827 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 HEBP2Q9Y5Z4 205 aa13.75□□□□□ -0.21
CD4-208ENST00000538827 MYO1CO00159 1063 aa13.74□□□□□ -0.21
CD4-208ENST00000538827 TAPBPO15533 448 aa13.74□□□□□ -0.21
CD4-208ENST00000538827 ITM2AO43736 263 aa13.74□□□□□ -0.21
CD4-208ENST00000538827 WDR47O94967 919 aa13.74□□□□□ -0.21
CD4-208ENST00000538827 ANXA6P08133 673 aa13.74□□□□□ -0.21
CD4-208ENST00000538827 RPS17P08708 135 aaKnown RBP13.74□□□□□ -0.21
CD4-208ENST00000538827 IMPDH1P20839 514 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms