RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 SUPT3HO75486 399 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 ALPPL2P10696 532 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 CD59P13987 128 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 SLC2A4P14672 509 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 GRK2P25098 689 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 HALP42357 657 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 CCR10P46092 362 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 RGS4P49798 205 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 MAZP56270 477 aaKnown RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 DNAJB13P59910 316 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 ABCE1P61221 599 aaKnown RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 SUZ12Q15022 739 aaKnown RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 RPE65Q16518 533 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 IYDQ6PHW0 289 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 CYHR1Q6ZMK1 362 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 NEK10Q6ZWH5 1172 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 ZNF771Q7L3S4 317 aaPredicted RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 C17orf82Q86X59 251 aaPredicted RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 SLC35F3Q8IY50 421 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 CACNA2D3Q8IZS8 1091 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 SFRP1Q8N474 314 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 CCDC197Q8NCU1 140 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 GPR156Q8NFN8 814 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 RHEBL1Q8TAI7 183 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 SLC37A2Q8TED4 501 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 PDLIM5Q96HC4 596 aaKnown RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 C12orf66Q96MD2 445 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 DUSP23Q9BVJ7 150 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 THAP1Q9NVV9 213 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 NCKIPSDQ9NZQ3 722 aa16.77■□□□□ 0.28
CLN6-202ENST00000538696 ZNF624Q9P2J8 865 aaPredicted RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 CFAP20Q9Y6A4 193 aaKnown RBP16.77■□□□□ 0.28
CLN6-202ENST00000538696 TRBV23OR9-2A0A075B6M9 112 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 IFRD1O00458 451 aaPredicted RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 FLRT2O43155 660 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 SIGLEC6O43699 453 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 SMIM24O75264 130 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 MTHFD1P11586 935 aaKnown RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 MTHFD2P13995 350 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 UBE2IP63279 158 aaKnown RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 ASPHQ12797 758 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 ABRQ12979 859 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 SLC14A1Q13336 389 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 ZCCHC8Q6NZY4 707 aaKnown RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 MYO1HQ8N1T3 1032 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 ARL10Q8N8L6 244 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 PTGR2Q8N8N7 351 aaPredicted RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 RFWD2Q8NHY2 731 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 STAG3L4Q8TBR4 150 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 TMEM237Q96Q45 408 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 NPHS2Q9NP85 383 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 IMP3Q9NV31 184 aaKnown RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 RNF112Q9ULX5 631 aa16.76■□□□□ 0.27
CLN6-202ENST00000538696 RIF1Q5UIP0 2472 aaKnown RBP16.76■□□□□ 0.27
CLN6-202ENST00000538696 LY6G6EA0A0G2JKS1 128 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 KIR2DS5A0A0G2JLQ3 304 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 PRAMEF33A0A0G2JMD5 474 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 A0A0G2JNG1 304 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 OR5K4A6NMS3 321 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 KIR2DS3K7RE56 304 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 IPO13O94829 963 aaKnown RBP16.75■□□□□ 0.27
CLN6-202ENST00000538696 MATN4O95460 622 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 TROVE2P10155 538 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLN6-202ENST00000538696 MYF5P13349 255 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 SLC19A1P41440 591 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 GRK6P43250 576 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 BDKRB1P46663 353 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 NAGLUP54802 743 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 NFKB2Q00653 900 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 RCN2Q14257 317 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 KIR2DS5Q14953 304 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 INAVAQ3KP66 663 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 C14orf28Q4W4Y0 310 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 STPG1Q5TH74 334 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 RASGRP3Q8IV61 690 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 SLC22A9Q8IVM8 553 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 CCNYL1Q8N7R7 359 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 FAM181AQ8N9Y4 354 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 CFAP61Q8NHU2 1237 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 MAPK15Q8TD08 544 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 SKA2Q8WVK7 121 aaPredicted RBP16.75■□□□□ 0.27
CLN6-202ENST00000538696 TFGQ92734 400 aaPredicted RBP16.75■□□□□ 0.27
CLN6-202ENST00000538696 CCDC126Q96EE4 140 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 PHF21BQ96EK2 531 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 KLHL14Q9P2G3 628 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 U3KQA8 63 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 ZFHX2Q9C0A1 2572 aaPredicted RBP16.75■□□□□ 0.27
CLN6-202ENST00000538696 DNAH14Q0VDD8 3507 aa16.75■□□□□ 0.27
CLN6-202ENST00000538696 HSPA4LO95757 839 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 CHRNGP07510 517 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 TPBGLP0DKB5 382 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 XRCC1P18887 633 aaPredicted RBP16.74■□□□□ 0.27
CLN6-202ENST00000538696 PROX2Q3B8N5 592 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 SBSNQ6UWP8 590 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 UNC5DQ6UXZ4 953 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 GPSM1Q86YR5 675 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 NAXDQ8IW45 347 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 LSMEM2Q8N112 164 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms