RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 PROM1O43490 865 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 B4GAT1O43505 415 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 MSCO60682 206 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ZNF780AO75290 641 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 SEC22BO75396 215 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SLC22A3O75751 556 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ANXA9O76027 345 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SEMA3DO95025 777 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PAPSS2O95340 614 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 AHSGP02765 367 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ALDOCP09972 364 aaKnown RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 ALOX12P18054 663 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CPN2P22792 545 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 HRH2P25021 359 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ARL1P40616 181 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 SLC9A3P48764 834 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 GZMKP49863 264 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 LIMK1P53667 647 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 MAPK10P53779 464 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 VBP1P61758 197 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 RPS6P62753 249 aaKnown RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 UBXN2AP68543 259 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CRADDP78560 199 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PRKCEQ02156 737 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 FAPQ12884 760 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PRKG2Q13237 762 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 KCTD2Q14681 263 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CA9Q16790 459 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 IMPG1Q17R60 797 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 LRRC26Q2I0M4 334 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SUPT20HL1Q3ZLR7 823 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SNAP47Q5SQN1 464 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ZNF678Q5SXM1 525 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 OTUD3Q5T2D3 398 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 SHQ1Q6PI26 577 aaKnown RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 MPZL3Q6UWV2 235 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SLC46A3Q7Z3Q1 461 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 KDELC2Q7Z4H8 507 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SNX20Q7Z614 316 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PIGZQ86VD9 579 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 C12orf40Q86WS4 652 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 RNF130Q86XS8 419 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PM20D2Q8IYS1 436 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SLC38A6Q8IZM9 456 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 RDH10Q8IZV5 341 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 Q8N9G6 341 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 ANKRD53Q8N9V6 530 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PPHLN1Q8NEY8 458 aaKnown RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 FLAD1Q8NFF5 587 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 HEXDCQ8WVB3 486 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 NTAN1Q96AB6 310 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 MASTLQ96GX5 879 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 TMEM80Q96HE8 168 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 FAM167AQ96KS9 214 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 HSFY1Q96LI6 401 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PPP1R36Q96LQ0 422 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 HEXIM2Q96MH2 286 aaKnown RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 TMEM209Q96SK2 561 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PITX2Q99697 317 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SLC30A2Q9BRI3 323 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ACAT2Q9BWD1 397 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CDADC1Q9BWV3 514 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 C1QTNF3Q9BXJ4 246 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 ELOVL4Q9GZR5 314 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CCDC90BQ9GZT6 254 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 DPEP3Q9H4B8 488 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PRDM12Q9H4Q4 367 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 CAB39LQ9H9S4 337 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 C12orf4Q9NQ89 552 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PXMP2Q9NR77 195 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 PAQR5Q9NXK6 330 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 KLHL8Q9P2G9 620 aaPredicted RBP6.56□□□□□ -1.36
USP28-207ENST00000538475 POLLQ9UGP5 575 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 SLCO3A1Q9UIG8 710 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 NUDT5Q9UKK9 219 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 FZD10Q9ULW2 581 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 MAPRE3Q9UPY8 281 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 RNF6Q9Y252 685 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 KCNE2Q9Y6J6 123 aa6.56□□□□□ -1.36
USP28-207ENST00000538475 NRCAMQ92823 1304 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 RLFQ13129 1914 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 KRT87PA6NCN2 255 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 A8MU76 341 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 TMEM233B4DJY2 109 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 PTGES3LE9PB15 166 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 E9PQ18 207 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 GNGT2O14610 69 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 VPS26AO75436 327 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 LRIG2O94898 1065 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 WISP3O95389 354 aaPredicted RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 TSPAN12O95859 305 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 WDPCPO95876 746 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
USP28-207ENST00000538475 CST1P01037 141 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 CYBBP04839 570 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 IFNA16P05015 189 aa6.55□□□□□ -1.36
USP28-207ENST00000538475 ASNSP08243 561 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms