RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 RPS6KA3P51812 740 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 SLBPQ14493 270 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCARB1-205ENST00000538291 MAPK14Q16539 360 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 GFOD2Q3B7J2 385 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 PRAMEF14Q5SWL7 426 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 PRAMEF13Q5VWM6 474 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 PGBD2Q6P3X8 592 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 TNFAIP8L2Q6P589 184 aaPredicted RBP16.5■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF527Q8NB42 609 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 OR2AP1Q8NGE2 309 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 BPIFB1Q8TDL5 484 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 DIRAS2Q96HU8 199 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 ZSWIM3Q96MP5 696 aa16.5■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF726A6NNF4 738 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TPST2O60704 377 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 PRKCGP05129 697 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CHRNB2P17787 502 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CHRNA4P43681 627 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 MC1RQ01726 317 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 PLGLB1Q02325 96 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 SLC10A7Q0GE19 358 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 FBXL22Q6P050 247 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 NATD1Q8N6N6 113 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CAMK1GQ96NX5 476 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 OSBPL2Q9H1P3 480 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 RNF121Q9H920 327 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 C11orf16Q9NQ32 467 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 ZNF446Q9NWS9 450 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 SCNN1AP37088 669 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TXNDC8Q6A555 127 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 P4HA3Q7Z4N8 544 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 LRRC57Q8N9N7 239 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 OR10H4Q8NGA5 316 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 RGMAQ96B86 450 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 FRMD6Q96NE9 622 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CCM2Q9BSQ5 444 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TRPV5Q9NQA5 729 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 ANXA2P2A6NMY6 339 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 VSTM5A8MXK1 200 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TFECO14948 347 aaPredicted RBP16.49■□□□□ 0.23
SCARB1-205ENST00000538291 ANXA2P07355 339 aaKnown RBP16.49■□□□□ 0.23
SCARB1-205ENST00000538291 PUDPQ08623 228 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 STX12Q86Y82 276 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 ZDHHC21Q8IVQ6 265 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CEP295NLQ96MC4 621 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 DGAT2Q96PD7 388 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 FNIP2Q9P278 1114 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CAPN8A6NHC0 703 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A9O60656 530 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A6P19224 532 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A1P22309 533 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A4P22310 534 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 VIPR1P32241 457 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A3P35503 534 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 ABATP80404 500 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 VLDLRP98155 873 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TOR1AIP1Q5JTV8 583 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 SYPL2Q5VXT5 272 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 TDRPQ86YL5 185 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 NDC1Q9BTX1 674 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 CCSER2Q9H7U1 834 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A7Q9HAW7 530 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A10Q9HAW8 530 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 UGT1A8Q9HAW9 530 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 FBXL12Q9NXK8 326 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 GRIP1Q9Y3R0 1128 aa16.49■□□□□ 0.23
SCARB1-205ENST00000538291 POU2F1P14859 743 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 RFC2P35250 354 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 TSPAN5P62079 268 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 SLC5A9Q2M3M2 681 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 PLA2G15Q8NCC3 412 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CYB5D2Q8WUJ1 264 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CHCHD6Q9BRQ6 235 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CST11Q9H112 138 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 C12orf65Q9H3J6 166 aaKnown RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 TLR9Q9NR96 1032 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 TDP1Q9NUW8 608 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 LGALS13Q9UHV8 139 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 PCDHGB7Q9Y5F8 929 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 A0A075B6Q4 140 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 FAM149AA5PLN7 773 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 TRIM3O75382 744 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 AGR2O95994 175 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 MT-ND1P03886 318 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 KLK3P07288 261 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 TSC22D1Q15714 1073 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 SLC29A4Q7RTT9 530 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 COQ8BQ96D53 544 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CFL2Q9Y281 166 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 A0A0G2JN53 185 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 SAP18O00422 153 aaKnown RBP16.48■□□□□ 0.23
SCARB1-205ENST00000538291 PEX12O00623 359 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 VNN1O95497 513 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 PAX7P23759 505 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CXCR1P25024 350 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 CLCNKAP51800 687 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 QSOX2Q6ZRP7 698 aa16.48■□□□□ 0.23
SCARB1-205ENST00000538291 SETD6Q8TBK2 473 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms