RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SHMT2P34897 504 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 PMS2P54278 862 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 CDKN2DP55273 166 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 GFERP55789 205 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 POU4F1Q01851 419 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 PRKG2Q13237 762 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 COL28A1Q2UY09 1125 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ACSBG2Q5FVE4 666 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 GIMAP7Q8NHV1 300 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 JPH3Q8WXH2 748 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-205ENST00000536255 USP7Q93009 1102 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 TSPAN17Q96FV3 270 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 TGM7Q96PF1 710 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 RAB11FIP5Q9BXF6 653 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 DPH1Q9BZG8 443 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ACSL6Q9UKU0 697 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
RPAIN-205ENST00000536255 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
RPAIN-205ENST00000536255 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 OR5K3A6NET4 321 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 EFCAB7A8K855 629 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 B4E171 279 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 C9orf172C9J069 976 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-205ENST00000536255 PIAS1O75925 651 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 C1QAP02745 245 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 CATP04040 527 aaKnown RBP13.13□□□□□ -0.31
RPAIN-205ENST00000536255 ABHD2P08910 425 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 SAT1P21673 171 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TSPAN7P41732 249 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 IL2P60568 153 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TLE3Q04726 772 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 PAQR3Q6TCH7 311 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 AMIGO1Q86WK6 493 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 CPNE9Q8IYJ1 553 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 MYO1HQ8N1T3 1032 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 OR4E2Q8NGC2 313 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TAAR9Q96RI9 348 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 GPR22Q99680 433 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 SLC30A3Q99726 388 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 MCMBPQ9BTE3 642 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 POPDC3Q9HBV1 291 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 SYTL2Q9HCH5 934 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 HRASLS2Q9NWW9 162 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 OCIAD1Q9NX40 245 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 OR6C2Q9NZP2 312 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 TSR3Q9UJK0 312 aaKnown RBP13.13□□□□□ -0.31
RPAIN-205ENST00000536255 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
RPAIN-205ENST00000536255 OR6C74A6NCV1 312 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 PABPN1LA6NDY0 278 aaKnown RBP13.12□□□□□ -0.31
RPAIN-205ENST00000536255 KLK10O43240 276 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 ZBTB14O43829 449 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 PSIP1O75475 530 aaKnown RBP13.12□□□□□ -0.31
RPAIN-205ENST00000536255 C1orf105O95561 183 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 C8GP07360 202 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 TUBBP07437 444 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 INHBAP08476 426 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 RAB28P51157 221 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 RAB15P59190 212 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 TIAL1Q01085 375 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■■■□ 23
RPAIN-205ENST00000536255 SP140Q13342 867 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 USP10Q14694 798 aaKnown RBP13.12□□□□□ -0.31
RPAIN-205ENST00000536255 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 IRGCQ6NXR0 463 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 PRSS42Q7Z5A4 293 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 CNPY4Q8N129 248 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 NKAPQ8N5F7 415 aaKnown RBP13.12□□□□□ -0.31
RPAIN-205ENST00000536255 BMPERQ8N8U9 685 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 CD180Q99467 661 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 OLFM1Q99784 485 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 DDA1Q9BW61 102 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 SLC39A1Q9NY26 324 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 LNPEPQ9UIQ6 1025 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 NFS1Q9Y697 457 aa13.12□□□□□ -0.31
RPAIN-205ENST00000536255 ZNF839A8K0R7 811 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 RIPK2O43353 540 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 KIF1CO43896 1103 aaKnown RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 RASSF9O75901 435 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 MYBL2P10244 700 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 STMN1P16949 149 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 ZNF37AP17032 561 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CYP2A7P20853 494 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 CD82P27701 267 aa13.11□□□□□ -0.31
RPAIN-205ENST00000536255 HSD17B2P37059 387 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms