RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 FTH1P02794 183 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PBLDP30039 288 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 TSFMP43897 325 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ATP5OP48047 213 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ARSFP54793 590 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 EMP3P54852 163 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 EIF3EP60228 445 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 MRPL49Q13405 166 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 DBN1Q16643 649 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 KYNUQ16719 465 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 EIF2S3LQ2VIR3 472 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 P3H1Q32P28 736 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 LYPLAL1Q5VWZ2 237 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 OVCH1Q7RTY7 1134 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 CLDN19Q8N6F1 224 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 TTC13Q8NBP0 860 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC35B2Q8TB61 432 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 HMGCLL1Q8TB92 370 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 DLG3Q92796 817 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ZUFSPQ96AP4 578 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 DNAJC1Q96KC8 554 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 GOLPH3Q9H4A6 298 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 ASF1BQ9NVP2 202 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 NXT1Q9UKK6 140 aaKnown RBP10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 CDYLQ9Y232 598 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 PCDHA13Q9Y5I0 950 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 NUP210LQ5VU65 1888 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 CCDC168Q8NDH2 2452 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 MTORP42345 2549 aa10.8□□□□□ -0.68
CLSTN3-206ENST00000535668 IGLV3-12A0A075B6K2 115 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ANKUB1A6NFN9 424 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 TARM1B6A8C7 271 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 F8W8V4 182 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 KCNN4O15554 427 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 SLCO2B1O94956 709 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 PIM1P11309 404 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 PVRP15151 417 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ITGAXP20702 1163 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 FOXN2P32314 431 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 DCTP40126 519 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 FOLR3P41439 243 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ARCN1P48444 511 aaKnown RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 CDKN1CP49918 316 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 RAB28P51157 221 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 RWDD2BP57060 319 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 OLIG2Q13516 323 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 GRB7Q14451 532 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 TCTE1Q5JU00 501 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 FCRL6Q6DN72 434 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 LINC00523Q86TU6 105 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 CCDC50Q8IVM0 306 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ZADH2Q8N4Q0 377 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 PHC3Q8NDX5 983 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 OR5AR1Q8NGP9 310 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 CCDC110Q8TBZ0 833 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ALG3Q92685 438 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 C19orf60Q96EN9 201 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 RNF31Q96EP0 1072 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 LMF1Q96S06 567 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 RANBP9Q96S59 729 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 SPSB2Q99619 263 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 WDR77Q9BQA1 342 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 APOL2Q9BQE5 337 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 CARD6Q9BX69 1037 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 HEMGNQ9BXL5 484 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 SPRTNQ9H040 489 aaPredicted RBP10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 SPHK1Q9NYA1 384 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 EURLQ9NYK6 297 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 ASF1AQ9Y294 204 aa10.79□□□□□ -0.68
CLSTN3-206ENST00000535668 A0A1B0GX78 115 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 PCDH17O14917 1159 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 SRPX2O60687 465 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 S1PR4O95977 384 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 PEBP1P30086 187 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 PKLRP30613 574 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 STIP1P31948 543 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 CETN2P41208 172 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 RELAQ04206 551 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 FAM69BQ5VUD6 431 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 ARMC3Q5W041 872 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 ZNF324BQ6AW86 544 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 UNC5DQ6UXZ4 953 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 NLRP9Q7RTR0 991 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 CUZD1Q86UP6 607 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 KCNMB4Q86W47 210 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 LINC01555Q8NAE3 123 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 OR13J1Q8NGT2 312 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 ASZ1Q8WWH4 475 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 VPS50Q96JG6 964 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 C5orf34Q96MH7 638 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 PANX2Q96RD6 677 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 NRTNQ99748 197 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 SLX1AQ9BQ83 275 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 AGPAT4Q9NRZ5 378 aa10.78□□□□□ -0.68
CLSTN3-206ENST00000535668 IFT80Q9P2H3 777 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms