RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ULK4	Q96C45	1275 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	PBK	Q96KB5	322 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	TRAPPC9	Q96Q05	1148 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	BARD1	Q99728	777 aa	Known RBP	11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	GBA3	Q9H227	469 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	OR52A5	Q9H2C5	316 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	MVB12B	Q9H7P6	319 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	RNF14	Q9UBS8	474 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	PADI2	Q9Y2J8	665 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ALG6	Q9Y672	507 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	ARL5A	Q9Y689	179 aa		11.18	□□□□□ -0.62
CTNND1-238	ENST00000534647	IGLV3-16	A0A075B6K0	115 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	C2orf74	A8MZ97	194 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647		E7EQ34	232 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647		H3BMH7	237 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	BTN3A3	O00478	584 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	SPOP	O43791	374 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	CRTAM	O95727	393 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	GSTM1	P09488	218 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	RNF224	P0DH78	156 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	ATP1B2	P14415	290 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	ST6GAL1	P15907	406 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	CYP2A7	P20853	494 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	AGXT	P21549	392 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	ARCN1	P48444	511 aa	Known RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	GSTM4	Q03013	218 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	GPR33	Q49SQ1	333 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	CRB2	Q5IJ48	1285 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	BBS12	Q6ZW61	710 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	RAB43	Q86YS6	212 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	ADGRF3	Q8IZF5	1079 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	NXPE1	Q8N323	547 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	LRRC57	Q8N9N7	239 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	NACC2	Q96BF6	587 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	SNRNP40	Q96DI7	357 aa	Known RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	DCUN1D1	Q96GG9	259 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	SGSM3	Q96HU1	749 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	GORASP1	Q9BQQ3	440 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	ARNT2	Q9HBZ2	717 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	CASS4	Q9NQ75	786 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	RSPH14	Q9UHP6	348 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	EFR3B	Q9Y2G0	817 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	AAR2	Q9Y312	384 aa	Known RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	AP1M2	Q9Y6Q5	423 aa		11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647		V9GYY5	206 aa	Predicted RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.17	□□□□□ -0.62
CTNND1-238	ENST00000534647	TRBV5-4	A0A0C4DH59	114 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	CCDC66	A2RUB6	948 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	GSAP	A4D1B5	854 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	MIF4GD	A9UHW6	222 aa	Known RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647		C9J4A7	227 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	APOC4-APOC2	K7ER74	178 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	IFRD1	O00458	451 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	BTN3A1	O00481	513 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	CES2	O00748	559 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZNF749	O43361	778 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	LDLR	P01130	860 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	APOC2	P02655	101 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	GYS2	P54840	703 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	MRPL49	Q13405	166 aa	Known RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	ATP1A4	Q13733	1029 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	BOP1	Q14137	746 aa	Known RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	MYBPC3	Q14896	1274 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	PRR30	Q53SZ7	412 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	KAZN	Q674X7	775 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	ITPRIPL1	Q6GPH6	555 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	RHBDD2	Q6NTF9	364 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	ZNF449	Q6P9G9	518 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	CDHR3	Q6ZTQ4	885 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	SNX20	Q7Z614	316 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	AMIGO1	Q86WK6	493 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	IQCK	Q8N0W5	287 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	UBL4B	Q8N7F7	174 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	OR52E1	Q8NGJ3	308 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	EPS8L3	Q8TE67	593 aa	Known RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	3e-8	■■■■□ 21.6
CTNND1-238	ENST00000534647	TCTN2	Q96GX1	697 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	FER1L6-AS2	Q96M78	137 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	PPP1R2P1	Q96PQ5	205 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	FERD3L	Q96RJ6	166 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	COPS8	Q99627	209 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	FICD	Q9BVA6	458 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	COG4	Q9H9E3	785 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	VPS37B	Q9H9H4	285 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	B3GNT3	Q9Y2A9	372 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	CENPE	Q02224	2701 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	HIVEP3	Q5T1R4	2406 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	SEC16A	O15027	2179 aa		11.16	□□□□□ -0.62
CTNND1-238	ENST00000534647	CREBBP	Q92793	2442 aa		11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647		A6NL46	340 aa		11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647	ENO4	A6NNW6	628 aa		11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647		H7C0S8	307 aa		11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647	IPO13	O94829	963 aa	Known RBP	11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647	ALPP	P05187	535 aa		11.15	□□□□□ -0.62
CTNND1-238	ENST00000534647	RPLP1	P05386	114 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms