RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 BBS5Q8N3I7 341 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 PAF1Q8N7H5 531 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 EXD3Q8N9H8 876 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 PPP1R14CQ8TAE6 165 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 ARRDC2Q8TBH0 407 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 KIAA1524Q8TCG1 905 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 NSMCE1Q8WV22 266 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 PATE1Q8WXA2 126 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 MAML1Q92585 1016 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 USP7Q93009 1102 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 SCAMP4Q969E2 229 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 FATE1Q969F0 183 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 TMEM159Q96B96 161 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 TSGA13Q96PP4 275 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 AGAP2Q99490 1192 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 SEMA3CQ99985 751 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 NUDT22Q9BRQ3 303 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 GSDMCQ9BYG8 508 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 ABCG8Q9H221 673 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 POFUT1Q9H488 388 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 SUDS3Q9H7L9 328 aaPredicted RBP5.12□□□□□ -1.59
ATM-224ENST00000534625 RDH14Q9HBH5 336 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 PARPBPQ9NWS1 579 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 TRNAU1APQ9NX07 287 aaKnown RBP5.12□□□□□ -1.59
ATM-224ENST00000534625 RCOR3Q9P2K3 495 aaPredicted RBP5.12□□□□□ -1.59
ATM-224ENST00000534625 PISDQ9UG56 409 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 CD84Q9UIB8 345 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 ANAPC7Q9UJX3 599 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 CAPN11Q9UMQ6 739 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 NENFQ9UMX5 172 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 TMEM98Q9Y2Y6 226 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 PLEKHM1Q9Y4G2 1056 aa5.12□□□□□ -1.59
ATM-224ENST00000534625 FLNCQ14315 2725 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 DOPEY2Q9Y3R5 2298 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 IGHV5-10-1A0A0J9YXX1 117 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 A0A0J9YYE9 177 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 GOLGA6CA6NDK9 693 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 GOLGA6BA6NDN3 693 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CAPN8A6NHC0 703 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 RHPN2P1A8MT19 583 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ZNF891A8MT65 544 aaPredicted RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 PPM1DO15297 605 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 TRBC1P01850 177 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 GYPCP04921 128 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 JUNP05412 331 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 GOLGA6DP0CG33 693 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CCL4P13236 92 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 KRT10P13645 584 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ZNF30P17039 623 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 KRT4P19013 534 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 WT1P19544 449 aaPredicted RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 CCNCP24863 283 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 NFKBIAP25963 317 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ALDH4A1P30038 563 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 KIR2DL3P43628 341 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 GPR1P46091 355 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 LIMK2P53671 638 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 MAPK10P53779 464 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 TAS2R40P59535 323 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ITKQ08881 620 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 NIPAL4Q0D2K0 466 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ILF3Q12906 894 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATM-224ENST00000534625 KRT81Q14533 505 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 C16orf72Q14CZ0 275 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CLPPQ16740 277 aaPredicted RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 HADHQ16836 314 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 LINC00303Q3SY05 128 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 PYCR3Q53H96 274 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ANKRD20A8PQ5CZ79 823 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CCDC122Q5T0U0 273 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 FAM182AQ5T1J6 154 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 NKAIN2Q5VXU1 208 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 NCBP2-AS2Q69YL0 99 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 DOK6Q6PKX4 331 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 SLC30A9Q6PML9 568 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 TRIM74Q86UV6 250 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 VASH2Q86V25 355 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 PIM3Q86V86 326 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 NRSN1Q8IZ57 195 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATM-224ENST00000534625 PQLC3Q8N755 202 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 KCTD6Q8NC69 237 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 ZNF564Q8TBZ8 553 aaPredicted RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 RAPGEF5Q92565 580 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 FAF2Q96CS3 445 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 AP2M1Q96CW1 435 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CLIP3Q96DZ5 547 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 SGF29Q96ES7 293 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 MED8Q96G25 268 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 COX14Q96I36 57 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 OR2M4Q96R27 311 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 WDR24Q96S15 920 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CMKLR1Q99788 373 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 RIOK2Q9BVS4 552 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 B3GNT4Q9C0J1 378 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 POLR1EQ9GZS1 481 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 INTS7Q9NVH2 962 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 RBM22Q9NW64 420 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATM-224ENST00000534625 GOLGA6AQ9NYA3 693 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 GPRC5BQ9NZH0 403 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms