RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 IL23RQ5VWK5 629 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 TRMT11Q7Z4G4 463 aaKnown RBP13.05□□□□□ -0.32
BEST1-208ENST00000534553 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 SFTPA1Q8IWL2 248 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 TDHQ8IZJ6 230 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 DPP10Q8N608 796 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 GOLM1Q8NBJ4 401 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 OR2L2Q8NH16 312 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 DNAJB8Q8NHS0 232 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 SELENOMQ8WWX9 145 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 PYDC1Q8WXC3 89 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 LRRC58Q96CX6 371 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 COX14Q96I36 57 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 C1orf50Q9BV19 199 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 OR2AG1Q9H205 316 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 MAP10Q9P2G4 905 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 CD300AQ9UGN4 299 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 SLC22A14Q9Y267 594 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 DOCK8Q8NF50 2099 aa13.05□□□□□ -0.32
BEST1-208ENST00000534553 MGAT4DA6NG13 374 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 TMEM202A6NGA9 273 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 BAG2O95816 211 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 PRPS2P11908 318 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 HSD3B1P14060 373 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 HSD17B1P14061 328 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 SLC2A4P14672 509 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 HSD3B2P26439 372 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 SLC7A2P52569 658 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 NME5P56597 212 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 PFN3P60673 137 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 UFM1P61960 85 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 ABRQ12979 859 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 NFYCQ13952 458 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 CPSF6Q16630 551 aaKnown RBP eCLIP13.04□□□□□ -0.32
BEST1-208ENST00000534553 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 ZNF648Q5T619 568 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 FRG2Q64ET8 278 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 PNCKQ6P2M8 343 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 AGTRAPQ6RW13 159 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 OR56A3Q8NH54 315 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 FRG2BQ96QU4 278 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 NMRK1Q9NWW6 199 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 STOX2Q9P2F5 926 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 KCNE1BA0A087WTH5 132 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 FFAR3O14843 346 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 CASQ2O14958 399 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 CLGNO14967 610 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 MID1O15344 667 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 GPR42O15529 346 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 RPN2P04844 631 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 IL6P05231 212 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 G6PDP11413 515 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 ATP6V1C1P21283 382 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 GALK1P51570 392 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 IRF8Q02556 426 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 SFSWAPQ12872 951 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 NEK5Q6P3R8 708 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 THOC6Q86W42 341 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 CFAP206Q8IYR0 622 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 BHLHE22Q8NFJ8 381 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 OR2T3Q8NH03 318 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 ZNF184Q99676 751 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 GABRG3Q99928 467 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 C1QTNF7Q9BXJ2 289 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 POLR3HQ9Y535 204 aaPredicted RBP13.04□□□□□ -0.32
BEST1-208ENST00000534553 KCNE2Q9Y6J6 123 aa13.04□□□□□ -0.32
BEST1-208ENST00000534553 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 PRORSD1PA6NEY8 169 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 ANHXE9PGG2 379 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 H0YIV9 168 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 K7ESM1 405 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 FXYD1O00168 92 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 PEX1O43933 1283 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 SEC22BO75396 215 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 C1orf105O95561 183 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 VARSP26640 1264 aaKnown RBP13.03□□□□□ -0.32
BEST1-208ENST00000534553 NTSR1P30989 418 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 HALP42357 657 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 ZFP36L2P47974 494 aaKnown RBP13.03□□□□□ -0.32
BEST1-208ENST00000534553 PREPP48147 710 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 CLNS1AP54105 237 aaKnown RBP13.03□□□□□ -0.32
BEST1-208ENST00000534553 CHIT1Q13231 466 aa13.03□□□□□ -0.32
BEST1-208ENST00000534553 E2F2Q14209 437 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms