RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 AHRRA9YTQ3 701 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM72CH0Y354 149 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CCL21O00585 134 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 PDXKO00764 312 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TOR1BO14657 336 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MAPK13O15264 365 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 POLR2DO15514 142 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 BUB1O43683 1085 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SNX2O60749 519 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ALOX12BO75342 701 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM63AO94886 807 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 HSP90AA1P07900 732 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 STSP08842 583 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC9A1P19634 815 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KLK2P20151 261 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 XPAP23025 273 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 PTX3P26022 381 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SSTR2P30874 369 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 PTGER4P35408 488 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TRIM23P36406 574 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 GARSP41250 739 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CLK3P49761 638 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 NDST2P52849 883 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 IST1P53990 364 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ELLP55199 621 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 HDAC4P56524 1084 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 PER3P56645 1201 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA1024LP59773 190 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MXRA7P84157 204 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 GNA12Q03113 381 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC20A2Q08357 652 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ILF3Q12906 894 aaKnown RBP eCLIP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FOXD4Q12950 439 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 RALGDSQ12967 914 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MTM1Q13496 603 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MYBPC3Q14896 1274 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC39A14Q15043 492 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ACOX1Q15067 660 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CYTH1Q15438 398 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CLPPQ16740 277 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 UGP2Q16851 508 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 DCAF10Q5QP82 559 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM72AQ5TYM5 149 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KRT39Q6A163 491 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM72DQ6L9T8 149 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FBXO38Q6PIJ6 1188 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 WDR74Q6RFH5 385 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SHC4Q6S5L8 630 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM92BQ6ZTR7 304 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TMEM110Q86TL2 294 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FAM72BQ86X60 149 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TGIF2LYQ8IUE0 185 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 PASD1Q8IV76 773 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ARHGEF19Q8IW93 802 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 NXPE1Q8N323 547 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CBARPQ8N350 705 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 GUF1Q8N442 669 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TTC30BQ8N4P2 665 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 AFAP1L2Q8N4X5 818 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ENDOVQ8N8Q3 282 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CCDC150Q8NCX0 1101 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CATSPER1Q8NEC5 780 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FBXL13Q8NEE6 735 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 OR2AP1Q8NGE2 309 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 OR10G6Q8NH81 332 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 DNAJB14Q8TBM8 379 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA1524Q8TCG1 905 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 THAP4Q8WY91 577 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ARHGEF2Q92974 986 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MR1Q95460 341 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 C9orf72Q96LT7 481 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TRAPPC9Q96Q05 1148 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 SLC2A13Q96QE2 648 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 USP28Q96RU2 1077 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 C1QTNF7Q9BXJ2 289 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 GSDMCQ9BYG8 508 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FRMD8Q9BZ67 464 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TNMDQ9H2S6 317 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 IFT22Q9H7X7 185 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FGF21Q9NSA1 209 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 GPR83Q9NYM4 423 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 CGNQ9P2M7 1197 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 TBC1D29Q9UFV1 150 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KIAA1257Q9ULG3 409 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KCNK6Q9Y257 313 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FRMD4BQ9Y2L6 1034 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 KLF2Q9Y5W3 355 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 FLNAP21333 2647 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 NSD1Q96L73 2696 aaPredicted RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 ZANQ9Y493 2812 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MDC1Q14676 2089 aaKnown RBP2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 RYR3Q15413 4870 aa2.91□□□□□ -1.94
CHMP4A-208ENST00000534106 MYO7BQ6PIF6 2116 aa2.9□□□□□ -1.94
CHMP4A-208ENST00000534106 A0A0A6YYJ9 748 aa2.9□□□□□ -1.95
CHMP4A-208ENST00000534106 A0A1B0GUH1 482 aa2.9□□□□□ -1.95
CHMP4A-208ENST00000534106 PVALEFA0A1B0GWK0 134 aa2.9□□□□□ -1.95
CHMP4A-208ENST00000534106 GOLGA6CA6NDK9 693 aa2.9□□□□□ -1.95
CHMP4A-208ENST00000534106 GOLGA6BA6NDN3 693 aa2.9□□□□□ -1.95
CHMP4A-208ENST00000534106 DVL2O14641 736 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms