RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 ARNTLO00327 626 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 PRAMEF4O60810 478 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 RECQL5O94762 991 aaPredicted RBP27.74■■■□□ 2.03
SAMD1-202ENST00000533683 ADRB3P13945 408 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 ELP6Q0PNE2 266 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 KIAA0040Q15053 153 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.74■■■□□ 2.03
SAMD1-202ENST00000533683 PRAMEF9Q5VWM5 478 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 VITQ6UXI7 678 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 L3MBTL4Q8NA19 623 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 GLMNQ92990 594 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 FBXL8Q96CD0 374 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 TMEM74Q96NL1 305 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 C1orf109Q9NX04 203 aa27.74■■■□□ 2.03
SAMD1-202ENST00000533683 K7ESM1 405 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 GSK3BP49841 420 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 PFN3P60673 137 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 DLEU7Q6UYE1 221 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 NLRP8Q86W28 1048 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 LIX1Q8N485 282 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 FOXJ1Q92949 421 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 ALG2Q9H553 416 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 TBC1D3BA6NDS4 549 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 ZNF839A8K0R7 811 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 IFRD1O00458 451 aaPredicted RBP27.73■■■□□ 2.03
SAMD1-202ENST00000533683 PLA2G4EQ3MJ16 856 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 GPR149Q86SP6 731 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 SELENOMQ8WWX9 145 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 LRTOMTQ8WZ04 291 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 CXorf56Q9H5V9 222 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 ZDHHC4Q9NPG8 344 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 ASIC5Q9NY37 505 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 ACTR3BQ9P1U1 418 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 SNX6Q9UNH7 406 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 KIAA1549LQ6ZVL6 1849 aa27.73■■■□□ 2.03
SAMD1-202ENST00000533683 COL4A3Q01955 1670 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 C6P13671 934 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 MAP4P27816 1152 aaKnown RBP27.72■■■□□ 2.03
SAMD1-202ENST00000533683 OPRD1P41143 372 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 NEK2P51955 445 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 LIPEQ05469 1076 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 CACHD1Q5VU97 1274 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 TMEM154Q6P9G4 183 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 TRIM74Q86UV6 250 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 SPPL2CQ8IUH8 684 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 CATSPER1Q8NEC5 780 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 CANT1Q8WVQ1 401 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 BTBD9Q96Q07 612 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 ELOVL6Q9H5J4 265 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 MMP20O60882 483 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 LCN8Q6JVE9 175 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 SUSD1Q6UWL2 747 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 IFNEQ86WN2 208 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 HID1Q8IV36 788 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 ERLEC1Q96DZ1 483 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 NUS1Q96E22 293 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 PPP1R16AQ96I34 528 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 DZANK1Q9NVP4 752 aa27.72■■■□□ 2.03
SAMD1-202ENST00000533683 AQP12BA6NM10 295 aa27.71■■■□□ 2.03
SAMD1-202ENST00000533683 SMNDC1O75940 238 aaKnown RBP eCLIP27.71■■■□□ 2.03
SAMD1-202ENST00000533683 PBLDP30039 288 aaPredicted RBP27.71■■■□□ 2.03
SAMD1-202ENST00000533683 MMAAQ8IVH4 418 aaKnown RBP27.71■■■□□ 2.03
SAMD1-202ENST00000533683 AQP12AQ8IXF9 295 aa27.71■■■□□ 2.03
SAMD1-202ENST00000533683 TRIM15Q9C019 465 aa27.71■■■□□ 2.03
SAMD1-202ENST00000533683 GULP1Q9UBP9 304 aa27.71■■■□□ 2.03
SAMD1-202ENST00000533683 MAGEA13PA6NCF6 341 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 EPOPA6NHQ4 379 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 ARPC2O15144 300 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 PDHA2P29803 388 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 IL12RB1P42701 662 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 EEFSECP57772 596 aaKnown RBP27.7■■■□□ 2.03
SAMD1-202ENST00000533683 CCSMST1Q4G0I0 132 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 ZBTB18Q99592 522 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 KCTD14Q9BQ13 255 aaPredicted RBP27.7■■■□□ 2.03
SAMD1-202ENST00000533683 PBX4Q9BYU1 374 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 DPY30Q9C005 99 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 LMAN2LQ9H0V9 348 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 EPHX3Q9H6B9 360 aa27.7■■■□□ 2.03
SAMD1-202ENST00000533683 KIF26AQ9ULI4 1882 aaPredicted RBP27.7■■■□□ 2.03
SAMD1-202ENST00000533683 RNASEH1O60930 286 aaKnown RBP27.7■■■□□ 2.02
SAMD1-202ENST00000533683 UBTFL6P0CB48 400 aaPredicted RBP27.7■■■□□ 2.02
SAMD1-202ENST00000533683 ZNF658BQ4V348 819 aaPredicted RBP27.7■■■□□ 2.02
SAMD1-202ENST00000533683 USP39Q53GS9 565 aaKnown RBP27.7■■■□□ 2.02
SAMD1-202ENST00000533683 ZNF765Q7L2R6 523 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 SLC22A15Q8IZD6 547 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 SUSD6Q92537 303 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 UHRF1Q96T88 793 aaPredicted RBP27.7■■■□□ 2.02
SAMD1-202ENST00000533683 EFHD1Q9BUP0 239 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 SEMA6AQ9H2E6 1030 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 HCN2Q9UL51 889 aa27.7■■■□□ 2.02
SAMD1-202ENST00000533683 C15orf38-AP3S2A0A0A6YYH1 394 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 BCKDHAP12694 445 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 GJA4P35212 333 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 FOLH1Q04609 750 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 FCHO2Q0JRZ9 810 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 CHIT1Q13231 466 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 MED21Q13503 144 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 RUNX3Q13761 415 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 IRAK1BP1Q5VVH5 260 aa27.69■■■□□ 2.02
SAMD1-202ENST00000533683 RAET1GQ6H3X3 334 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms