RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 FAM174AQ8TBP5 190 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 HM13Q8TCT9 377 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 DLG3Q92796 817 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 N4BP2L2Q92802 583 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 UTP4Q969X6 686 aaKnown RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 G3BP2Q9UN86 482 aaKnown RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 KCNK6Q9Y257 313 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ST14Q9Y5Y6 855 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 STX16-NPEPL1H3BU86 382 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 SDHDO14521 159 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 STX16O14662 325 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 LIN7AO14910 233 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ENO3P13929 434 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CSNK1EP49674 416 aaKnown RBP18.03■□□□□ 0.48
SMPD1-208ENST00000533123 FOXA1P55317 472 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CLCQ05315 142 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 PHKG1Q16816 387 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 NXNQ6DKJ4 435 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 RINLQ6ZS11 566 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ACAD11Q709F0 780 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ADAMTSL2Q86TH1 951 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 C11orf74Q86VG3 221 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 FBXO27Q8NI29 283 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 OR2M4Q96R27 311 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 KCNA7Q96RP8 456 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 MIPEPQ99797 713 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 ZSCAN32Q9NX65 697 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 KLF15Q9UIH9 416 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 PCTPQ9UKL6 214 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 STK38LQ9Y2H1 464 aa18.03■□□□□ 0.48
SMPD1-208ENST00000533123 CUL9Q8IWT3 2517 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 TLR4O00206 839 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 BCAT2O15382 392 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-208ENST00000533123 ATP6V1G2O95670 118 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 GSTM1P09488 218 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 EZRP15311 586 aaKnown RBP18.02■□□□□ 0.48
SMPD1-208ENST00000533123 GSTM4Q03013 218 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 EIF2B5Q13144 721 aaKnown RBP18.02■□□□□ 0.48
SMPD1-208ENST00000533123 ZNF528Q3MIS6 628 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 ANKS6Q68DC2 871 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 CEP68Q76N32 757 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 GLMNQ92990 594 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 MARK4Q96L34 752 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 TMEM168Q9H0V1 697 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 OSGEPL1Q9H4B0 414 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 ZBTB26Q9HCK0 441 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 TMEM74BQ9NUR3 256 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 NUDT4Q9NZJ9 180 aa18.02■□□□□ 0.48
SMPD1-208ENST00000533123 TDRD6O60522 2096 aaKnown RBP18.02■□□□□ 0.48
SMPD1-208ENST00000533123 TRPC5OSA6NMA1 111 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 H3BM21 787 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 RASGRP1O95267 797 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 GUCA1CO95843 209 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 CD1EP15812 388 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 RPL10P27635 214 aaKnown RBP18.02■□□□□ 0.47
SMPD1-208ENST00000533123 PTPN4P29074 926 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 ABRQ12979 859 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 LCP2Q13094 533 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 METRNLQ641Q3 311 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 IQCHQ86VS3 1027 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 SLC22A15Q8IZD6 547 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 POU5F2Q8N7G0 328 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 SPDYE1Q8NFV5 336 aaPredicted RBP18.02■□□□□ 0.47
SMPD1-208ENST00000533123 CFAP61Q8NHU2 1237 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 TIMM29Q9BSF4 260 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 TUBB6Q9BUF5 446 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 TBC1D10AQ9BXI6 508 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 TCEAL2Q9H3H9 227 aaPredicted RBP18.02■□□□□ 0.47
SMPD1-208ENST00000533123 TAGLN3Q9UI15 199 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 PSMD13Q9UNM6 376 aa18.02■□□□□ 0.47
SMPD1-208ENST00000533123 EIF3FO00303 357 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-208ENST00000533123 FFAR2O15552 330 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 RASSF2P50749 326 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 ZBTB44Q8NCP5 570 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 CCL4L1Q8NHW4 92 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 AGAP11Q8TF27 550 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 ZNF483Q8TF39 744 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-208ENST00000533123 MAELQ96JY0 434 aaKnown RBP18.01■□□□□ 0.47
SMPD1-208ENST00000533123 FAR2Q96K12 515 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 C1QTNF3Q9BXJ4 246 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 DGKBQ9Y6T7 804 aa18.01■□□□□ 0.47
SMPD1-208ENST00000533123 E2F3O00716 465 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 VCLP18206 1134 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 PRDX3P30048 256 aaKnown RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 AFF3P51826 1226 aaKnown RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 CTBSQ01459 385 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 TBCCQ15814 346 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 UGT3A2Q3SY77 523 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 METTL21CQ5VZV1 264 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 TLDC1Q6P9B6 456 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 PARGQ86W56 976 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 DCP2Q8IU60 420 aaKnown RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 CATSPER2Q96P56 530 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 MEAF6Q9HAF1 191 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 OARD1Q9Y530 152 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 PTGDR2Q9Y5Y4 395 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 KMT2EQ8IZD2 1858 aa18■□□□□ 0.47
SMPD1-208ENST00000533123 KIF1CO43896 1103 aaKnown RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 HNRNPCL1O60812 293 aaKnown RBP18■□□□□ 0.47
SMPD1-208ENST00000533123 TNFP01375 233 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms