RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 C19orf47Q8N9M1 422 aaKnown RBP29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 SLCO2A1Q92959 643 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 SIGLEC10Q96LC7 697 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 MENTQ9BUN1 341 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 AKIRIN1Q9H9L7 192 aaPredicted RBP29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 PCYOX1Q9UHG3 505 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 VPS9D1Q9Y2B5 631 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 MAD1L1Q9Y6D9 718 aa29.27■■■□□ 2.28
SSSCA1-207ENST00000533115 A0A0J9YY10 115 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 ISM1B1AKI9 464 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 C21orf140B9A014 251 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 NIPSNAP2O75323 286 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 PEBP1P30086 187 aaKnown RBP29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 PTK6Q13882 451 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 SLC5A12Q1EHB4 618 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 PRAMEF17Q5VTA0 474 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 FAM199XQ6PEV8 388 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 SLC38A9Q8NBW4 561 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 SKA2Q8WVK7 121 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 TCTN2Q96GX1 697 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 CAPZA3Q96KX2 299 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 INTS10Q9NVR2 710 aaKnown RBP29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 ASIC3Q9UHC3 531 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 SERTAD3Q9UJW9 196 aa29.26■■■□□ 2.27
SSSCA1-207ENST00000533115 USP1O94782 785 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 SFTPCP11686 197 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 THOC5Q13769 683 aaKnown RBP29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 ZNF789Q5FWF6 425 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 ATP1A1-AS1Q5TC04 95 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 ZNF470Q6ECI4 717 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 TTC23LQ6PF05 361 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 LINC01555Q8NAE3 123 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 LRFN5Q96NI6 719 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 NAPGQ99747 312 aaPredicted RBP29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 CHRNA10Q9GZZ6 450 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 CIDEBQ9UHD4 219 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 NFS1Q9Y697 457 aa29.25■■■□□ 2.27
SSSCA1-207ENST00000533115 DNALI1O14645 258 aaPredicted RBP29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 S1PR4O95977 384 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 PKMP14618 531 aaKnown RBP29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 CHRM3P20309 590 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 CD9P21926 228 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 PTGIRP43119 386 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 CCR10P46092 362 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 GPS2Q13227 327 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 ZIC1Q15915 447 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 CREG2Q8IUH2 290 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 FAM136AQ96C01 138 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 IL17FQ96PD4 163 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 FAM60AQ9NP50 221 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 MRFAP1Q9Y605 127 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 SAR1BQ9Y6B6 198 aa29.24■■■□□ 2.27
SSSCA1-207ENST00000533115 SPTBP11277 2137 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 CTAGE9A4FU28 777 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 RASGRF2O14827 1237 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 C1orf105O95561 183 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 CYP2A7P20853 494 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 ITGA1P56199 1179 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 GBX1Q14549 363 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 LONRF1Q17RB8 773 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 DEFB109BQ30KR1 87 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 PCGF5Q86SE9 256 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 DENND6AQ8IWF6 608 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 OR2L8Q8NGY9 312 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 MR1Q95460 341 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 RAD51AP1Q96B01 352 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 CLIP3Q96DZ5 547 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 FOPNLQ96NB1 174 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 GPR87Q9BY21 358 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 C20orf96Q9NUD7 363 aaPredicted RBP29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 GEMIN8Q9NWZ8 242 aaKnown RBP29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 SLC39A10Q9ULF5 831 aa29.23■■■□□ 2.27
SSSCA1-207ENST00000533115 ZNF462Q96JM2 2506 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 CREG1O75629 220 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 KLK3P07288 261 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ATP5DP30049 168 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 POLE2P56282 527 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 CTBP1Q13363 440 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ERV3-1Q14264 604 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ZNF517Q6ZMY9 492 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ZNF605Q86T29 641 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 LMNTD2Q8IXW0 634 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 DSELQ8IZU8 1212 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 C2orf73Q8N5S3 287 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 LMNTD1Q8N9Z9 388 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 N4BP2L2Q92802 583 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 SLC22A18Q96BI1 424 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 RAB11FIP5Q9BXF6 653 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ADNPQ9H2P0 1102 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 ACTR5Q9H9F9 607 aaPredicted RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 GALPQ9UBC7 116 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 RUVBL2Q9Y230 463 aaKnown RBP29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 FAM169AQ9Y6X4 670 aa29.22■■■□□ 2.27
SSSCA1-207ENST00000533115 BOD1L1Q8NFC6 3051 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 E5RI56 91 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 E7EQ34 232 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 MEN1O00255 615 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 RECKO95980 971 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 CCNFP41002 786 aa29.21■■■□□ 2.27
SSSCA1-207ENST00000533115 BDKRB1P46663 353 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms