RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	GSTM1	P09488	218 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ITGAX	P20702	1163 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	KDELR1	P24390	212 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	SHMT2	P34897	504 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ARSF	P54793	590 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	GSTM4	Q03013	218 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	RPA4	Q13156	261 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	SLC5A12	Q1EHB4	618 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ZNF449	Q6P9G9	518 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	KDELC1	Q6UW63	502 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	CFAP206	Q8IYR0	622 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ZNF398	Q8TD17	642 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	BLOC1S5	Q8TDH9	187 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ZNF592	Q92610	1267 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	ULK4	Q96C45	1275 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	C14orf79	Q96F83	325 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	DCUN1D1	Q96GG9	259 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	CALR3	Q96L12	384 aa	Known RBP	11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	TEKT5	Q96M29	485 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	LMF1	Q96S06	567 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	C19orf43	Q9BQ61	176 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	LACRT	Q9GZZ8	138 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	KLHL25	Q9H0H3	589 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	OR52A5	Q9H2C5	316 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	COG4	Q9H9E3	785 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	FAM60A	Q9NP50	221 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	SEMA3G	Q9NS98	782 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	UVRAG	Q9P2Y5	699 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	HS3ST3B1	Q9Y662	390 aa		11.97	□□□□□ -0.49
CAPN1-223	ENST00000533079	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079		A0A087X0T9	212 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079		A0A0J9YY10	115 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	CTAGE9	A4FU28	777 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	RCCD1	A6NED2	376 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	AGAP14	A8MT82	685 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	MASP2	O00187	686 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	STX7	O15400	261 aa	Known RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	KCNN4	O15554	427 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SGTA	O43765	313 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SRP72	O76094	671 aa	Known RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	POLB	P06746	335 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	FAM228B	P0C875	321 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	FDXR	P22570	491 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	CA7	P43166	264 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	WNT3A	P56704	352 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	TAS2R40	P59535	323 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	BOP1	Q14137	746 aa	Known RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SLC9A5	Q14940	896 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	TCEAL1	Q15170	157 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SLC1A5	Q15758	541 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	DEFB110	Q30KQ9	67 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	GFRAL	Q6UXV0	394 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	BZW1	Q7L1Q6	419 aa	Known RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	DAAM2	Q86T65	1068 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	ZNF655	Q8N720	491 aa	Predicted RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	TRIM58	Q8NG06	486 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	POM121	Q96HA1	1249 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SPSB2	Q99619	263 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	SPRTN	Q9H040	489 aa	Predicted RBP	11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	ASB8	Q9H765	288 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	IRAK4	Q9NWZ3	460 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	UBP1	Q9NZI7	540 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	PLCL2	Q9UPR0	1127 aa		11.96	□□□□□ -0.49
CAPN1-223	ENST00000533079	FER1L5	A0AVI2	2057 aa		11.96	□□□□□ -0.5
CAPN1-223	ENST00000533079	TRAV17	A0A0B4J275	112 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	TRGV8	A0A0C4DH27	118 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079		A0A0U1RQJ8	604 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	DYTN	A2CJ06	578 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	LRRD1	A4D1F6	860 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	C2orf81	A6NN90	581 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	CCL21	O00585	134 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	DYNC1I1	O14576	645 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	FANCG	O15287	622 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	KDM1A	O60341	852 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	USP1	O94782	785 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	CRYAB	P02511	175 aa	Known RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	UGT2B7	P16662	529 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	PTPN3	P26045	913 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	GCGR	P47871	477 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	KCNK10	P57789	538 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	ARG2	P78540	354 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	RBPJ	Q06330	500 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	MPP3	Q13368	585 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	NOMO1	Q15155	1222 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	ALKBH5	Q6P6C2	394 aa	Known RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	KIRREL2	Q6UWL6	708 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	TMEM207	Q6UWW9	146 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	OVCH1	Q7RTY7	1134 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	CDH24	Q86UP0	819 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	RAPGEF5	Q92565	580 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	THOC3	Q96J01	351 aa	Known RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	MRGPRX2	Q96LB1	330 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	NAPG	Q99747	312 aa	Predicted RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	HGH1	Q9BTY7	390 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	FSD1L	Q9BXM9	530 aa		11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	MAK16	Q9BXY0	300 aa	Known RBP	11.95	□□□□□ -0.5
CAPN1-223	ENST00000533079	SLC22A11	Q9NSA0	550 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms