RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ATP1A4Q13733 1029 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 OASLQ15646 514 aaKnown RBP17.19■□□□□ 0.34
PCF11-206ENST00000533018 KYNUQ16719 465 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 NLRP9Q7RTR0 991 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 ZNF655Q8N720 491 aaPredicted RBP17.19■□□□□ 0.34
PCF11-206ENST00000533018 SGSM3Q96HU1 749 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 ZNF778Q96MU6 729 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 MFRPQ9BY79 579 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 FRMD8P1Q9BZ68 369 aaPredicted RBP17.19■□□□□ 0.34
PCF11-206ENST00000533018 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 GPR83Q9NYM4 423 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 LUZP4Q9P127 313 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 IFT80Q9P2H3 777 aaPredicted RBP17.19■□□□□ 0.34
PCF11-206ENST00000533018 NDOR1Q9UHB4 597 aa17.19■□□□□ 0.34
PCF11-206ENST00000533018 ZSCAN9O15535 394 aaPredicted RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 HCRTR1O43613 425 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 DPM1O60762 260 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 SUN1O94901 812 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 TPBGLP0DKB5 382 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 CCR7P32248 378 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 UQCRFS1P47985 274 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 DCDP81605 110 aaKnown RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 SLC9A5Q14940 896 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 KIR2DS3Q14952 304 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 DNAJC21Q5F1R6 531 aaKnown RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 GAS2L3Q86XJ1 694 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 SLC13A5Q86YT5 568 aaPredicted RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 C2orf73Q8N5S3 287 aaPredicted RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 RANBP9Q96S59 729 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 DHRS4Q9BTZ2 278 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 NUDT9Q9BW91 350 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 SLAMF7Q9NQ25 335 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 DHCR7Q9UBM7 475 aaKnown RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 CIDEBQ9UHD4 219 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 PTRH2Q9Y3E5 179 aaKnown RBP17.18■□□□□ 0.34
PCF11-206ENST00000533018 TCAF1Q9Y4C2 921 aa17.18■□□□□ 0.34
PCF11-206ENST00000533018 ANKRD12Q6UB98 2062 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 IQCF5A8MTL0 148 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 GOLGA6L6A8MZA4 724 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 KRT86O43790 486 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 CEACAM4O75871 244 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 RPN2P04844 631 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 APOA4P06727 396 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 CTSBP07858 339 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 ALAS2P22557 587 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 GNLYP22749 145 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 FOLR3P41439 243 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 RAB28P51157 221 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 SPTAN1Q13813 2472 aaKnown RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 SEMA3AQ14563 771 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 SLC5A12Q1EHB4 618 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 AARS2Q5JTZ9 985 aaKnown RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 PAPD7Q5XG87 772 aaKnown RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 RHBDD2Q6NTF9 364 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 TLDC1Q6P9B6 456 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 ZNF534Q76KX8 674 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 LDB1Q86U70 411 aaPredicted RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 TAX1BP1Q86VP1 789 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 FAM20CQ8IXL6 584 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 ASZ1Q8WWH4 475 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 NDC1Q9BTX1 674 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 AP1M1Q9BXS5 423 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 TSGA10Q9BZW7 698 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 CASS4Q9NQ75 786 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 CHRAC1Q9NRG0 131 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 PAK5Q9P286 719 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 RIMKLBQ9ULI2 386 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 PLCL2Q9UPR0 1127 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 KLHL20Q9Y2M5 609 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 PCDHGB7Q9Y5F8 929 aa17.17■□□□□ 0.34
PCF11-206ENST00000533018 SPTBN1Q01082 2364 aaKnown RBP17.17■□□□□ 0.34
PCF11-206ENST00000533018 PEX12O00623 359 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 ZSCAN5DPP0CG00 497 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SESN2P58004 480 aaPredicted RBP17.16■□□□□ 0.34
PCF11-206ENST00000533018 ESPL1Q14674 2120 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SSPNQ14714 243 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 TMED2Q15363 201 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 RPS6KA1Q15418 735 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 ZNF385CQ66K41 422 aaPredicted RBP17.16■□□□□ 0.34
PCF11-206ENST00000533018 PTRHD1Q6GMV3 140 aaKnown RBP17.16■□□□□ 0.34
PCF11-206ENST00000533018 JMJD6Q6NYC1 403 aaPredicted RBP17.16■□□□□ 0.34
PCF11-206ENST00000533018 VRK3Q8IV63 474 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SLC22A15Q8IZD6 547 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 KRT222Q8N1A0 295 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 DNAJC22Q8N4W6 341 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 GALNT11Q8NCW6 608 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 FLVCR1-AS1Q8TAF5 88 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 PROKR1Q8TCW9 393 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 LKAAEAR1Q8TD35 194 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
PCF11-206ENST00000533018 FER1L6-AS2Q96M78 137 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 GBP5Q96PP8 586 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 CATSPERZQ9NTU4 200 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SLC39A10Q9ULF5 831 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 SRPK3Q9UPE1 567 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 CDYLQ9Y232 598 aa17.16■□□□□ 0.34
PCF11-206ENST00000533018 BLACEA4D250 179 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms