RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SORCS1Q8WY21 1168 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MAGED4Q96JG8 741 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 C9orf16Q9BUW7 83 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 LATS2Q9NRM7 1088 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 NOTOA8MTQ0 251 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 M0QX08 132 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 FFAR2O15552 330 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CAPN1P07384 714 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 MATN1P21941 496 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 TRPC1P48995 793 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 RGS4P49798 205 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 ATP4BP51164 291 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 TPTEP56180 551 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 NEDD8Q15843 81 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MPP7Q5T2T1 576 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SBSNQ6UWP8 590 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CBR4Q8N4T8 237 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 TEX37Q96LM6 180 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 EMILIN2Q9BXX0 1053 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SUV39H2Q9H5I1 410 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 NUDT4Q9NZJ9 180 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 KMOO15229 486 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CLOCKO15516 846 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SEC24DO94855 1032 aaPredicted RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 LINC00271P0C7V0 271 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 GRIA3P42263 894 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 YBX1P67809 324 aaKnown RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 IL27RAQ6UWB1 636 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MBOAT1Q6ZNC8 495 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 PLEKHG7Q6ZR37 379 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 GOLGA7Q7Z5G4 137 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 ADAMTSL2Q86TH1 951 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 PARP8Q8N3A8 854 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SKA2Q8WVK7 121 aaPredicted RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CLIP3Q96DZ5 547 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SH3GL1Q99961 368 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 IL23AQ9NPF7 189 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 QPCTLQ9NXS2 382 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SLC25A13Q9UJS0 675 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 RAD51BO15315 384 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 NUAK1O60285 661 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 NTRK1P04629 796 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 LHCGRP22888 699 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 MLLT10P55197 1068 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 UFM1P61960 85 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 CCNYL2Q5T2Q4 361 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 SLX4IPQ5VYV7 408 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 NXPE1Q8N323 547 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 ZBTB2Q8N680 514 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 CYB5D2Q8WUJ1 264 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 VMP1Q96GC9 406 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 TXNDC15Q96J42 360 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 MTG2Q9H4K7 406 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 ELOVL2Q9NXB9 296 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 NDUFAF1Q9Y375 327 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 WNT6Q9Y6F9 365 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 FFAR3O14843 346 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 GRM6O15303 877 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 GPR42O15529 346 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 TIPRLO75663 272 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 FGBP02675 491 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 CD9P21926 228 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 CSNK1DP48730 415 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 IFITM2Q01629 132 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 GTF2H2Q13888 395 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 ATP13A5Q4VNC0 1218 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 SGO1Q5FBB7 561 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 PERM1Q5SV97 790 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 PPP2R2DQ66LE6 453 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 GTF2H2CQ6P1K8 395 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 USP45Q70EL2 814 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 ST13P5Q8NFI4 369 aaPredicted RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 OR4F6Q8NGB9 312 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 OR2T34Q8NGX1 318 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 NUDT8Q8WV74 236 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 POF1BQ8WVV4 589 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 FAM126AQ9BYI3 521 aaPredicted RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 HOXD1Q9GZZ0 328 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 IPPKQ9H8X2 491 aa11.3□□□□□ -0.6
USP35-207ENST00000530546 SDR39U1Q9NRG7 319 aaPredicted RBP11.3□□□□□ -0.6
USP35-207ENST00000530546 WWOXQ9NZC7 414 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms