RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ZC3HC1Q86WB0 502 aaKnown RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 NPAS4Q8IUM7 802 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 RXFP2Q8WXD0 754 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 RTP3Q9BQQ7 232 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 STRA6Q9BX79 667 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 RCOR3Q9P2K3 495 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 UXTQ9UBK9 157 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 BARX2Q9UMQ3 279 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 A0A087X0B3 334 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 A0A1W2PQ45 241 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 A0A1W2PQY0 241 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 DAPL1A0PJW8 107 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 C20orf202A1L168 122 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 CBY3A6NI87 242 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 HHLA1C9JL84 531 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 INMT-MINDY4F8WBC2 141 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 FFAR3O14843 346 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 GPR42O15529 346 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 DNAJA2O60884 412 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 RAMP2O60895 175 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 PAK4O96013 591 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 GLUD1P00367 558 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 PDYNP01213 254 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 CKMP06732 381 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 C8BP07358 591 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 COL6A2P12110 1019 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 BCKDHAP12694 445 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 IL7P13232 177 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 AGTR1P30556 359 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 TRIM23P36406 574 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 CLCN5P51795 746 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF135P52742 658 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 SLC26A5P58743 744 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF425Q6IV72 752 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 LBX2Q6XYB7 198 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 RELL1Q8IUW5 271 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 MITD1Q8WV92 249 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 SLC5A5Q92911 643 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF570Q96NI8 536 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 NELL2Q99435 816 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 MRPL57Q9BQC6 102 aaKnown RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 TAPBPLQ9BX59 468 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 C1QTNF7Q9BXJ2 289 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 LRFN1Q9P244 771 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 ASTN2O75129 1339 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 IGSF9BQ9UPX0 1349 aa7.12□□□□□ -1.27
CTNND1-216ENST00000527467 TRPM3Q9HCF6 1732 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-216ENST00000527467 SLC12A8A0AV02 714 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FAM205CA6NFA0 338 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 F8W036 122 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GSC2O15499 205 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 RFPL1O75677 317 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 DRD4P21917 467 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CSTF2P33240 577 aaKnown RBP eCLIP7.11□□□□□ -1.271e-7■■□□□ 12.3
CTNND1-216ENST00000527467 RPL13AP40429 203 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 BLOC1S1P78537 153 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 HTD2P86397 168 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF616Q08AN1 781 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ACOX1Q15067 660 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TIGD2Q4W5G0 525 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 WDR45BQ5MNZ6 344 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TREML2Q5T2D2 321 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ATG9BQ674R7 924 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 RABEPKQ7Z6M1 372 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZER1Q7Z7L7 766 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TSPAN33Q86UF1 283 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 KLHL36Q8N4N3 616 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 OR2AJ1Q8NGZ0 328 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FUNDC2Q9BWH2 189 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CFHR5Q9BXR6 569 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MEAF6Q9HAF1 191 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 OR2S2Q9NQN1 319 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GDF3Q9NR23 364 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 PARPBPQ9NWS1 579 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 FBXL3Q9UKT7 428 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 BTRCQ9Y297 605 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ATP6AP2A0A1C7CYW4 349 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 A8MXE2 369 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TRAFD1O14545 582 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TM7SF2O76062 418 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 H6PDO95479 791 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TACSTD2P09758 323 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 UCHL1P09936 223 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 TSHRP16473 764 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MANFP55145 182 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 MRPS6P82932 125 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 BEX3Q00994 111 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ZNF543Q08ER8 600 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 ST3GAL4Q11206 333 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 DYRK1AQ13627 763 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 RBM48Q5RL73 367 aaKnown RBP7.11□□□□□ -1.27
CTNND1-216ENST00000527467 CERCAMQ5T4B2 595 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GJB7Q6PEY0 223 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 SPPL2CQ8IUH8 684 aa7.11□□□□□ -1.27
CTNND1-216ENST00000527467 GPR156Q8NFN8 814 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms