RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 HIST1H2AGP0C0S8 130 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ERGP11308 486 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 HIST1H2ADP20671 130 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 HSD17B2P37059 387 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 PLA2G5P39877 138 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 KCNC1P48547 511 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ARHGAP19Q14CB8 494 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 TECRLQ5HYJ1 363 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 CDKL4Q5MAI5 379 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 PERM1Q5SV97 790 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 EFL1Q7Z2Z2 1120 aaKnown RBP16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SPRED1Q7Z699 444 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 EXOC3L1Q86VI1 746 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 BANPQ8N9N5 519 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 IFI44Q8TCB0 444 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 LCN9Q8WX39 176 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 HIST1H2AHQ96KK5 128 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 CCDC138Q96M89 665 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ATOH8Q96SQ7 321 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 PKP4Q99569 1192 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 HIST1H2AJQ99878 128 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 MRPL57Q9BQC6 102 aaKnown RBP16.04■□□□□ 0.16
CAPN1-205ENST00000526954 H2AFJQ9BTM1 129 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ACBD3Q9H3P7 528 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 EPB41L1Q9H4G0 881 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SLC32A1Q9H598 525 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ALG9Q9H6U8 611 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SSU72Q9NP77 194 aaKnown RBP16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SPATA7Q9P0W8 599 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 ICKQ9UPZ9 632 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 PCM1Q15154 2024 aa16.04■□□□□ 0.16
CAPN1-205ENST00000526954 SYCE1LA8MT33 242 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 COPEO14579 308 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 B4GAT1O43505 415 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 OPA1O60313 960 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 PKLRP30613 574 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 SHMT2P34897 504 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 GLRBP48167 497 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 ACADVLP49748 655 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 RAB28P51157 221 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 ILKQ13418 452 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 SQSTM1Q13501 440 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 PLCL1Q15111 1095 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TGFBIQ15582 683 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TRIP6Q15654 476 aaKnown RBP16.03■□□□□ 0.16
CAPN1-205ENST00000526954 CYP2A13Q16696 494 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 AGBL2Q5U5Z8 902 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 CDHR3Q6ZTQ4 885 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 AMIGO1Q86WK6 493 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 ZNF761Q86XN6 746 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TMEM151AQ8N4L1 468 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 RAB42Q8N4Z0 105 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 HMGCLL1Q8TB92 370 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 DENND1AQ8TEH3 1009 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 ZBTB9Q96C00 473 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TLCD1Q96CP7 247 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 APOPT1Q96IL0 206 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TBC1D10AQ9BXI6 508 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 MRPL46Q9H2W6 279 aaKnown RBP16.03■□□□□ 0.16
CAPN1-205ENST00000526954 SRMSQ9H3Y6 488 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 ARL15Q9NXU5 204 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 KCNK4Q9NYG8 393 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 OR6C2Q9NZP2 312 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 TMEM216Q9P0N5 145 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 GRID1Q9ULK0 1009 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 RNF112Q9ULX5 631 aa16.03■□□□□ 0.16
CAPN1-205ENST00000526954 UNC13CQ8NB66 2214 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 IGHV1OR21-1A0A087WYE8 117 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 KRT87PA6NCN2 255 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 PABPN1LA6NDY0 278 aaKnown RBP16.02■□□□□ 0.16
CAPN1-205ENST00000526954 TARM1B6A8C7 271 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 UBXN7O94888 489 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 SLC16A8O95907 504 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 SYF2O95926 243 aaKnown RBP16.02■□□□□ 0.16
CAPN1-205ENST00000526954 ALDH4A1P30038 563 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 OR1D5P58170 312 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 GPLD1P80108 840 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 ANKS6Q68DC2 871 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 KLHL35Q6PF15 583 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 FRA10AC1Q70Z53 315 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 DEFB124Q8NES8 71 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 OR4E2Q8NGC2 313 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 OR2L8Q8NGY9 312 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 FBXL8Q96CD0 374 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 CCDC3Q9BQI4 270 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 UTP6Q9NYH9 597 aaKnown RBP16.02■□□□□ 0.16
CAPN1-205ENST00000526954 NUDT4Q9NZJ9 180 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 CDV3Q9UKY7 258 aaKnown RBP16.02■□□□□ 0.16
CAPN1-205ENST00000526954 PLAGL1Q9UM63 463 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 PCDHGA1Q9Y5H4 931 aa16.02■□□□□ 0.16
CAPN1-205ENST00000526954 ZNF839A8K0R7 811 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 TYROBPO43914 113 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 KLK8O60259 260 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 ANXA5P08758 320 aa16.01■□□□□ 0.15
CAPN1-205ENST00000526954 SBK3P0C264 359 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms