RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 DNAJC21Q5F1R6 531 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 SPANXN3Q5MJ09 141 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 TEX35Q5T0J7 233 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 CASC4Q6P4E1 433 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 DOK6Q6PKX4 331 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 AFTPHQ6ULP2 937 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 C6orf15Q6UXA7 325 aaPredicted RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 CYS1Q717R9 158 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 DENND6AQ8IWF6 608 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ZBED8Q8IZ13 594 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 NAGSQ8N159 534 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 OR6P1Q8NGX9 317 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 THAP4Q8WY91 577 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 IFT81Q8WYA0 676 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 C9orf72Q96LT7 481 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ULBP3Q9BZM4 244 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 P2RY12Q9H244 342 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 EPB41L4BQ9H329 900 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 SAYSD1Q9NPB0 183 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 TRNAU1APQ9NX07 287 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 SIDT1Q9NXL6 827 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ZDHHC3Q9NYG2 299 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 MAP10Q9P2G4 905 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 SLC17A6Q9P2U8 582 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 ZC3H7BQ9UGR2 993 aaKnown RBP10.64□□□□□ -0.71
NEDD8-204ENST00000526430 MED16Q9Y2X0 877 aa10.64□□□□□ -0.71
NEDD8-204ENST00000526430 PIPSLA2A3N6 862 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CXorf49A8MYA2 514 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 NDC80O14777 642 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 VEGFDO43915 354 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 PIAS1O75925 651 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CDK14O94921 469 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 EML2O95834 649 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 POLBP06746 335 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 HOXB4P17483 251 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 ITGALP20701 1170 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 FASLGP48023 281 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 ITGA1P56199 1179 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 TIAL1Q01085 375 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CTBP1Q13363 440 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CUL1Q13616 776 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 ELOAQ14241 798 aaKnown RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 KYNUQ16719 465 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 LONRF1Q17RB8 773 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 HSP90AA5PQ58FG0 334 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 LDLRAP1Q5SW96 308 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 TEDDM1Q5T9Z0 273 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 NEPROQ6NW34 567 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 ZNF549Q6P9A3 640 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 MARK2Q7KZI7 788 aaKnown RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CILP2Q8IUL8 1156 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CNTN4Q8IWV2 1026 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 GSPT2Q8IYD1 628 aaKnown RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 IQCKQ8N0W5 287 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CLDN19Q8N6F1 224 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 BEND7Q8N7W2 519 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 EIF1ADQ8N9N8 165 aaKnown RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 OR10G6Q8NH81 332 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 LKAAEAR1Q8TD35 194 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 SNRNP40Q96DI7 357 aaKnown RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 C19orf60Q96EN9 201 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 CFAP36Q96G28 342 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 BIRC8Q96P09 236 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 NAT9Q9BTE0 207 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 FUT8Q9BYC5 575 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 FAM129AQ9BZQ8 928 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 NINJ2Q9NZG7 142 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 LUZP4Q9P127 313 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 SAMD15Q9P1V8 674 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 SLC30A1Q9Y6M5 507 aa10.63□□□□□ -0.71
NEDD8-204ENST00000526430 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
NEDD8-204ENST00000526430 C21orf140B9A014 251 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 GRID2O43424 1007 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 KATNA1O75449 491 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 HAUS5O94927 633 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ASMTLO95671 621 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 TTC4O95801 387 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 AHSGP02765 367 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 GNPDA1P46926 289 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PRAMEP78395 509 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CTBSQ01459 385 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 DNASE1L3Q13609 305 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ITIH4Q14624 930 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 UGT8Q16880 541 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 BCL7AQ4VC05 210 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CTSL3PQ5NE16 218 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CPZQ66K79 652 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 TMEM220Q6QAJ8 160 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PACS1Q6VY07 963 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CERS6Q6ZMG9 384 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 FAM83HQ6ZRV2 1179 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 C3orf62Q6ZUJ4 267 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 TAS2R42Q7RTR8 314 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PHYKPLQ8IUZ5 450 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 IFT20Q8IY31 132 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 LILRA3Q8N6C8 439 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms