RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 LYVE1Q9Y5Y7 322 aa2.04□□□□□ -2.08
ECHDC1-219ENST00000526299 HAT1O14929 419 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 TFECO14948 347 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 PHF1O43189 567 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 SLC2A2P11168 524 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 HLA-FP30511 346 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 ETV5P41161 510 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 TUBP50607 506 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 HNRNPA3P51991 378 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 RPS3AP61247 264 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 CSNK2BP67870 215 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 ITPRIPL2Q3MIP1 535 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 PRR30Q53SZ7 412 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 FRRS1Q6ZNA5 592 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 CDHR3Q6ZTQ4 885 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 TIPARPQ7Z3E1 657 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 HAUS6Q7Z4H7 955 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 ARHGAP12Q8IWW6 846 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 FRMD1Q8N878 549 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 PERPQ96FX8 193 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 SERAC1Q96JX3 654 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 B3GALT6Q96L58 329 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 NKX3-1Q99801 234 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 ARPC5LQ9BPX5 153 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 MGME1Q9BQP7 344 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 URM1Q9BTM9 101 aaKnown RBP2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 DNAJC18Q9H819 358 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 MTUS1Q9ULD2 1270 aa2.03□□□□□ -2.08
ECHDC1-219ENST00000526299 A0A087WWV3 80 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 HYKKA2RU49 373 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 DDHD2O94830 711 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 LDHAP00338 332 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 VTNP04004 478 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 ACTN1P12814 892 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 XBP1P17861 261 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 PDHA2P29803 388 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 LMAN1P49257 510 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 MAZP56270 477 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 EIF4A2Q14240 407 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 TNIP1Q15025 636 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 GRAMD1BQ3KR37 738 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 LCN1P1Q5VSP4 162 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 IGFL3Q6UXB1 125 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 CFAP206Q8IYR0 622 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 CD177Q8N6Q3 437 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 TRIML1Q8N9V2 468 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 MYRIPQ8NFW9 859 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 OR1L3Q8NH93 324 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 ERLEC1Q96DZ1 483 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 ELMOD3Q96FG2 381 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 DACH2Q96NX9 599 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 CHCHD5Q9BSY4 110 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 OR2B2Q9GZK3 357 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 SHARPINQ9H0F6 387 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM49AQ9H0Q0 323 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 PDCL3Q9H2J4 239 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 ZNF701Q9NV72 531 aaPredicted RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 SETD4Q9NVD3 440 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 RHCGQ9UBD6 479 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 KCNE2Q9Y6J6 123 aa2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.02□□□□□ -2.09
ECHDC1-219ENST00000526299 SRRM4A7MD48 611 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 GLRA3O75311 464 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 CDK2AP2O75956 126 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 SLCO2B1O94956 709 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 FDPSP14324 419 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 SLC6A6P31641 620 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 XGP55808 180 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 RHBDL3P58872 404 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 GCNT1Q02742 428 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 MELKQ14680 651 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 RARS2Q5T160 578 aaKnown RBP2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 ACAD10Q6JQN1 1059 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 NOTUMQ6P988 496 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 CHMP1BQ7LBR1 199 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 FAM131BQ86XD5 332 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 ZFAND4Q86XD8 727 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 CATSPERDQ86XM0 798 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 OR5M8Q8NGP6 311 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 OR13C3Q8NGS6 347 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 MOAP1Q96BY2 351 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 ZNF597Q96LX8 424 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 PSMB7Q99436 277 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 LGMNQ99538 433 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 NCAPGQ9BPX3 1015 aa2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 ZHX1Q9UKY1 873 aaPredicted RBP2.01□□□□□ -2.09
ECHDC1-219ENST00000526299 RRN3P2A6NIE6 340 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 SHISA7A6NL88 538 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 SCAMP1O15126 338 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 KRT6AP02538 564 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 KRT6BP04259 564 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 EIF2S1P05198 315 aaKnown RBP2□□□□□ -2.09
ECHDC1-219ENST00000526299 ZNF19P17023 458 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 RGS2P41220 211 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 KRT6CP48668 564 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 LBX1P52954 281 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 GUCY2DQ02846 1103 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 EFTUD2Q15029 972 aaKnown RBP eCLIP2□□□□□ -2.09
ECHDC1-219ENST00000526299 HERC3Q15034 1050 aa2□□□□□ -2.09
ECHDC1-219ENST00000526299 PCGF3Q3KNV8 242 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms