RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 MCOLN3Q8TDD5 553 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 NCSTNQ92542 709 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 ZDHHC12Q96GR4 267 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 NUDT22Q9BRQ3 303 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 SYNDIG1Q9H7V2 258 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 PARVBQ9HBI1 364 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 SNX15Q9NRS6 342 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 HRASLS2Q9NWW9 162 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 ATXN7L1Q9ULK2 861 aaPredicted RBP20.13■□□□□ 0.81
CD44-222ENST00000526025 WASF3Q9UPY6 502 aa20.13■□□□□ 0.81
CD44-222ENST00000526025 IQANK1A0A1B0GTG1 560 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ZNF839A8K0R7 811 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 SHBGP04278 402 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ADRB1P08588 477 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ANKRD34CP0C6C1 535 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 THRAP10827 490 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 PGGT1BP53609 377 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 AP1S2P56377 157 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 PRKAA1Q13131 559 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 CYP2A13Q16696 494 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 TAF1BQ53T94 588 aaPredicted RBP20.12■□□□□ 0.81
CD44-222ENST00000526025 ANKS6Q68DC2 871 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ZNF574Q6ZN55 896 aaPredicted RBP20.12■□□□□ 0.81
CD44-222ENST00000526025 RAPH1Q70E73 1250 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 USP53Q70EK8 1073 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 CMC1Q7Z7K0 106 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ADAMTSL2Q86TH1 951 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ADGRF3Q8IZF5 1079 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 ANKRD49Q8WVL7 239 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 RDH14Q9HBH5 336 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 SEMA5BQ9P283 1151 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 LNPEPQ9UIQ6 1025 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 TSR3Q9UJK0 312 aaKnown RBP20.12■□□□□ 0.81
CD44-222ENST00000526025 ACOT9Q9Y305 439 aa20.12■□□□□ 0.81
CD44-222ENST00000526025 SNRNP200O75643 2136 aaKnown RBP20.12■□□□□ 0.81
CD44-222ENST00000526025 OR6C74A6NCV1 312 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 BTN3A1O00481 513 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 HGSO14964 777 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 CASC3O15234 703 aaKnown RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 CAPN5O15484 640 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 CSO75390 466 aaKnown RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 MPOP05164 745 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 C2P06681 752 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 CCDC166P0CW27 439 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 JUPP14923 745 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 TYK2P29597 1187 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 INHBCP55103 352 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 ARMC6Q6NXE6 501 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 SBSNQ6UWP8 590 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 TMPRSS9Q7Z410 1059 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 PRSS42Q7Z5A4 293 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 TBC1D1Q86TI0 1168 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 RIBC1Q8N443 379 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 CHCHD4Q8N4Q1 142 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 JPH3Q8WXH2 748 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 DLG3Q92796 817 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 LIN37Q96GY3 246 aaPredicted RBP20.11■□□□□ 0.81
CD44-222ENST00000526025 CCDC138Q96M89 665 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 TRIM54Q9BYV2 358 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 EURLQ9NYK6 297 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 TLK1Q9UKI8 766 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 ADAMTS6Q9UKP5 1117 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 POMT2Q9UKY4 750 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 PDE10AQ9Y233 779 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 SPEGQ15772 3267 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 KIF26BQ2KJY2 2108 aa20.11■□□□□ 0.81
CD44-222ENST00000526025 A0A096LPK6 155 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 IGHV5-10-1A0A0J9YXX1 117 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 C2orf74A8MZ97 194 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 TRIM49D1C9J1S8 452 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 BTN3A3O00478 584 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 CDH16O75309 829 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 FKBP9O95302 570 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 CHRM5P08912 532 aaPredicted RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 HOXB3P14651 431 aaPredicted RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 CD1DP15813 335 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 PPM1FP49593 454 aaPredicted RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 CDKL1Q00532 357 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 EIF3IQ13347 325 aaKnown RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 KIR2DS3Q14952 304 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 CCSMST1Q4G0I0 132 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 SPNS2Q8IVW8 549 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 MYRIPQ8NFW9 859 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 DENND1AQ8TEH3 1009 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 HNRNPLLQ8WVV9 542 aaKnown RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 SLC22A18Q96BI1 424 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 CABS1Q96KC9 395 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 PKP4Q99569 1192 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 ROPN1BQ9BZX4 212 aaPredicted RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 STRADBQ9C0K7 418 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 ZMYND15Q9H091 742 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 XKR8Q9H6D3 395 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 ROPN1Q9HAT0 212 aaPredicted RBP20.1■□□□□ 0.81
CD44-222ENST00000526025 NMRAL1Q9HBL8 299 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 CTNNAL1Q9UBT7 734 aa20.1■□□□□ 0.81
CD44-222ENST00000526025 PIPSLA2A3N6 862 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 PABPN1LA6NDY0 278 aaKnown RBP20.09■□□□□ 0.81
CD44-222ENST00000526025 TLCD2A6NGC4 264 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 LTA4HP09960 611 aaKnown RBP20.09■□□□□ 0.81
CD44-222ENST00000526025 HIST1H2AGP0C0S8 130 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms