RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TMEM219Q86XT9 240 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 NRROSQ86YC3 692 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 MCEMP1Q8IX19 187 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 C1orf87Q8N0U7 546 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GBGT1Q8N5D6 347 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GCSAMQ8N6F7 178 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 C1orf52Q8N6N3 182 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 CCDC89Q8N998 374 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 DMBX1Q8NFW5 382 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 SPATA22Q8NHS9 363 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 SPATA20Q8TB22 786 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 PHF21AQ96BD5 680 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ERLEC1Q96DZ1 483 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 OXNAD1Q96HP4 312 aaPredicted RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 CEP295NLQ96MC4 621 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 TTC14Q96N46 770 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 POLR3CQ9BUI4 534 aaPredicted RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 COA1Q9GZY4 146 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 CSTL1Q9H114 145 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 SEMA6AQ9H2E6 1030 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 DDX31Q9H8H2 851 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 EVA1AQ9H8M9 152 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 UPF2Q9HAU5 1272 aaKnown RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 CD209Q9NNX6 404 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 ABCF3Q9NUQ8 709 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 GIMAP4Q9NUV9 329 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 TMEM30AQ9NV96 361 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 PSD3Q9NYI0 1048 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 HACL1Q9UJ83 578 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 FAF1Q9UNN5 650 aaPredicted RBP3.72□□□□□ -1.81
CD44-219ENST00000525685 EXOC6BQ9Y2D4 811 aa3.72□□□□□ -1.81
CD44-219ENST00000525685 A0A1B0GUL7 405 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 OR2A25A4D2G3 310 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ASPDHA6ND91 283 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 PRAC2D3DTV9 90 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ZNF587BE7ETH6 402 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 TMEM178BH3BS89 294 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 EIF3DO15371 548 aaKnown RBP eCLIP3.71□□□□□ -1.82
CD44-219ENST00000525685 FIBPO43427 364 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ZNF217O75362 1048 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 SURF6O75683 361 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 HSP90AA1P07900 732 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 AMD1P17707 334 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 BDNFP23560 247 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 RPS12P25398 132 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 NMBRP28336 390 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 EPHX2P34913 555 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 EPS15P42566 896 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 MMP14P50281 582 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ARSEP51690 589 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ZNF132P52740 706 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 TFCP2Q12800 502 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 TROAPQ12815 778 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 TNIP1Q15025 636 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 C15orf59Q2T9L4 293 aaPredicted RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 FAM98BQ52LJ0 330 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 BMP2KLQ5H9B9 411 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 RAD9BQ6WBX8 426 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ASB18Q6ZVZ8 466 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 INTS8Q75QN2 995 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 KBTBD6Q86V97 674 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 CERS5Q8N5B7 392 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 PRPF31Q8WWY3 499 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 LINGO1Q96FE5 620 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 CDRT15Q96T59 188 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 HGH1Q9BTY7 390 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 APOL6Q9BWW8 343 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 CHMP4BQ9H444 224 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 DENND2DQ9H6A0 471 aaPredicted RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 TRPC7Q9HCX4 862 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 PDE7BQ9NP56 450 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 RCC2Q9P258 522 aaKnown RBP3.71□□□□□ -1.82
CD44-219ENST00000525685 DNAJB4Q9UDY4 337 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 AMACRQ9UHK6 382 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 POLG2Q9UHN1 485 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 PLAGL1Q9UM63 463 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 ECM29Q5VYK3 1845 aa3.71□□□□□ -1.82
CD44-219ENST00000525685 FAM205AQ6ZU69 1335 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 MYO3BQ8WXR4 1341 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 DOCK2Q92608 1830 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 DOCK7Q96N67 2140 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 A0A1B0GUV1 79 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 TMEM8BA6NDV4 472 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 TULP2O00295 520 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 PLK4O00444 970 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 CAPN9O14815 690 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 NDUFS4O43181 175 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 HMMRO75330 724 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 ENTPD3O75355 529 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 TOMM70O94826 608 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 TUBBP07437 444 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 SELLP14151 372 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 PSMC4P43686 418 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 SUOXP51687 545 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 FUT6P51993 359 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 TIMM10P62072 90 aa3.7□□□□□ -1.82
CD44-219ENST00000525685 FKBP1AP62942 108 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms