RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 LVRNQ6Q4G3 990 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SBSNQ6UWP8 590 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 ATG14Q6ZNE5 492 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CEP128Q6ZU80 1094 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 RPS27LQ71UM5 84 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 EFL1Q7Z2Z2 1120 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 ISCA2Q86U28 154 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TRIM73Q86UV7 250 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TRABD2AQ86V40 505 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 EXOC3L1Q86VI1 746 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TAX1BP1Q86VP1 789 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SDR16C5Q8N3Y7 309 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 ARL10Q8N8L6 244 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 FAM181AQ8N9Y4 354 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 OR52E1Q8NGJ3 308 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 FLVCR1-AS1Q8TAF5 88 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TMEM159Q96B96 161 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PANX3Q96QZ0 392 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 NUDT22Q9BRQ3 303 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TWSG1Q9GZX9 223 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CCDC68Q9H2F9 335 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SYNPO2LQ9H987 977 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TMBIM4Q9HC24 238 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 GPAMQ9HCL2 828 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 NSMCE4AQ9NXX6 385 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 UTP6Q9NYH9 597 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 TMEM216Q9P0N5 145 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 KLHL42Q9P2K6 505 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 SLC17A7Q9P2U7 560 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 LRIT1Q9P2V4 623 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 PSMC3IPQ9P2W1 217 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 SLC24A2Q9UI40 661 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 ACSL5Q9ULC5 683 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CORO1CQ9ULV4 474 aaPredicted RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 ASF1AQ9Y294 204 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 KLHL20Q9Y2M5 609 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 TDRKHQ9Y2W6 561 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 ANKRD12Q6UB98 2062 aa6.3□□□□□ -1.4
CD44-214ENST00000525211 CNOT1A5YKK6 2376 aaKnown RBP6.3□□□□□ -1.4
CD44-214ENST00000525211 EME2A4GXA9 379 aaPredicted RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 TARM1B6A8C7 271 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 UBXN8O00124 270 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 QSOX1O00391 747 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SLC30A4O14863 429 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 FLRT2O43155 660 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 HCRTR1O43613 425 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 KIF1CO43896 1103 aaKnown RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 DFNA5O60443 496 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SYF2O95926 243 aaKnown RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 CTSBP07858 339 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 CKMT1AP12532 417 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PVRP15151 417 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 STMN1P16949 149 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TFEBP19484 476 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TYK2P29597 1187 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 GDF5P43026 501 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 GRK6P43250 576 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 CCR10P46092 362 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SERPINB4P48594 390 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SERPINB8P50452 374 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SERPINB9P50453 376 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PDX1P52945 283 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 LIMK1P53667 647 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 GFERP55789 205 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 IL2P60568 153 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PRR20EP86478 221 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PRR20CP86479 221 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PRR20DP86480 221 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PRR20BP86481 221 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PRR20AP86496 221 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 HHEXQ03014 270 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 SLC18A2Q05940 514 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 RASA2Q15283 850 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 NR0B2Q15466 257 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TECRLQ5HYJ1 363 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 ZCCHC8Q6NZY4 707 aaKnown RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 SUSD1Q6UWL2 747 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 LRIG3Q6UXM1 1119 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TMEM26Q6ZUK4 368 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 RAPH1Q70E73 1250 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 SPRED1Q7Z699 444 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 B3GNT8Q7Z7M8 397 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 ADGRF3Q8IZF5 1079 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 OR4E2Q8NGC2 313 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 OR5K2Q8NHB8 316 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 IFI44Q8TCB0 444 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 MAPK15Q8TD08 544 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 ASZ1Q8WWH4 475 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 EXT2Q93063 718 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 TLCD1Q96CP7 247 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 CXorf40BQ96DE9 158 aa6.29□□□□□ -1.4
CD44-214ENST00000525211 PDLIM5Q96HC4 596 aaKnown RBP6.29□□□□□ -1.4
CD44-214ENST00000525211 ATOH8Q96SQ7 321 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms