RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CCDC183Q5T5S1 534 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 ERMARDQ5T6L9 678 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 ADALQ6DHV7 355 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 TRAT1Q6PIZ9 186 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 MEX3BQ6ZN04 569 aaKnown RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 RABEPKQ7Z6M1 372 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 CEP57Q86XR8 500 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 GBGT1Q8N5D6 347 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 MRPL43Q8N983 215 aaKnown RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 POGLUT1Q8NBL1 392 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 ANKRD20A12PQ8NF67 263 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 KIAA1524Q8TCG1 905 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 TMEM255BQ8WV15 326 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 SLC5A11Q8WWX8 675 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 CTNNBL1Q8WYA6 563 aaPredicted RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 PTERQ96BW5 349 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 OXNAD1Q96HP4 312 aaPredicted RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 MMP27Q9H306 513 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 DENND2DQ9H6A0 471 aaPredicted RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 TM9SF3Q9HD45 589 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 KLHL1Q9NR64 748 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 WWOXQ9NZC7 414 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 NOSIPQ9Y314 301 aaKnown RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 CAB39Q9Y376 341 aaPredicted RBP4.72□□□□□ -1.65
SKP1-211ENST00000523359 TRIM17Q9Y577 477 aa4.72□□□□□ -1.65
SKP1-211ENST00000523359 KDRP35968 1356 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 H0YC42 278 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 ABCB1P08183 1280 aaPredicted RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 VPREB1P12018 145 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 GJA1P17302 382 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 NR2F2P24468 414 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 TMOD1P28289 359 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 MATR3P43243 847 aaKnown RBP eCLIP4.71□□□□□ -1.66
SKP1-211ENST00000523359 EEF1A1P68104 462 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 SIRPAP78324 504 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 MECOMQ03112 1051 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 CBX3Q13185 183 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 MELKQ14680 651 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 SMU1Q2TAY7 513 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 EEF1A1P5Q5VTE0 462 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 CAPRIN2Q6IMN6 1127 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 FAM171BQ6P995 826 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 TEX38Q6PEX7 206 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 SPSB3Q6PJ21 355 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 ADIPOR2Q86V24 386 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 POMGNT2Q8NAT1 580 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 CNNM3Q8NE01 707 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 CCDC148Q8NFR7 591 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 WDR20Q8TBZ3 569 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 TAS1R2Q8TE23 839 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 SEMA4DQ92854 862 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 ERLEC1Q96DZ1 483 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 GIMAP5Q96F15 307 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 LINGO1Q96FE5 620 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 COG3Q96JB2 828 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 FAM84BQ96KN1 310 aaPredicted RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 DGAT2Q96PD7 388 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 NEK1Q96PY6 1258 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 SLC22A12Q96S37 553 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 TXN2Q99757 166 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 THUMPD3Q9BV44 507 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 OPA3Q9H6K4 179 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 SLC35C2Q9NQQ7 365 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 MBNL1Q9NR56 388 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 TAB2Q9NYJ8 693 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 HOOK1Q9UJC3 728 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 PIN4Q9Y237 131 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 WBP11Q9Y2W2 641 aaKnown RBP4.71□□□□□ -1.66
SKP1-211ENST00000523359 YIPF1Q9Y548 306 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 TRPV2Q9Y5S1 764 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
SKP1-211ENST00000523359 ASPDHA6ND91 283 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 ANKRD66B4E2M5 251 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 PGRMC2O15173 223 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 BUD23O43709 281 aaKnown RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 BMP10O95393 424 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 KRT19P08727 400 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 CASP3P42574 277 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 ARCN1P48444 511 aaKnown RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 ITGA7Q13683 1181 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 MAJINQ3KP22 176 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 MPP7Q5T2T1 576 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 TMEM211Q6ICI0 200 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 SHQ1Q6PI26 577 aaKnown RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 MUC20Q8N307 709 aaPredicted RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 RBM15BQ8NDT2 890 aaKnown RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 TEKT1Q969V4 418 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 VPS33AQ96AX1 596 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 CCDC114Q96M63 670 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 ZNF582Q96NG8 517 aaPredicted RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 CCDC106Q9BWC9 280 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 ACPTQ9BZG2 426 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 RWDD1Q9H446 243 aaPredicted RBP4.7□□□□□ -1.66
SKP1-211ENST00000523359 SLA2Q9H6Q3 261 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 TRPC7Q9HCX4 862 aa4.7□□□□□ -1.66
SKP1-211ENST00000523359 NINJ2Q9NZG7 142 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms