RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SPRED3Q2MJR0 410 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 USP41Q3LFD5 358 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FASTKD1Q53R41 847 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TTC38Q5R3I4 469 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 HP1BP3Q5SSJ5 553 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TTI2Q6NXR4 508 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ANKRD54Q6NXT1 300 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 MSANTD2Q6P1R3 559 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SLC27A1Q6PCB7 646 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 XKRXQ6PP77 449 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CYP20A1Q6UW02 462 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 LRRC55Q6ZSA7 311 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF767PQ75MW2 155 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 PRSS42Q7Z5A4 293 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ADGRD2Q7Z7M1 963 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 RBM23Q86U06 439 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ANKRD46Q86W74 232 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CHERPQ8IWX8 916 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SLC35F3Q8IY50 421 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 MREGQ8N565 214 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 C19orf18Q8NEA5 215 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 OR6X1Q8NH79 312 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 OR10J5Q8NHC4 309 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 LKAAEAR1Q8TD35 194 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 MAGEE2Q8TD90 523 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CREB3L4Q8TEY5 395 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 AENQ8WTP8 325 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SUSD6Q92537 303 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 TCEAL4Q96EI5 215 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 MCRS1Q96EZ8 462 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ALG14Q96F25 216 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 PGAP3Q96FM1 320 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 IGSF21Q96ID5 467 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 PBKQ96KB5 322 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 RILPQ96NA2 401 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 QKIQ96PU8 341 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CYP2S1Q96SQ9 504 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 LRFN3Q9BTN0 628 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 POTEKPQ9BYX7 375 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ZBP1Q9H171 429 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 C12orf65Q9H3J6 166 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 SFXN1Q9H9B4 322 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 FBXO34Q9NWN3 711 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 B3GNT2Q9NY97 397 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CLEC1BQ9P126 229 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 WARS2Q9UGM6 360 aaKnown RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 CLEC2DQ9UHP7 191 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ERVW-1Q9UQF0 538 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 DHRS7Q9Y394 339 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 USP15Q9Y4E8 981 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF318Q5VUA4 2279 aa7.38□□□□□ -1.23
HDAC3-216ENST00000523088 C2orf71A6NGG8 1288 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 WASH4PA8MWX3 477 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 LOC730098B7Z3J9 87 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NPIPB8E9PQR5 432 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 LINC01565O15544 149 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 OPHN1O60890 802 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CIB2O75838 187 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SOX30O94993 753 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MFN2O95140 757 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 LCKP06239 509 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ADH1AP07327 375 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SERPINA6P08185 405 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 RNF224P0DH78 156 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 DRD4P21917 467 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CDC25AP30304 524 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ARL2P36404 184 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PLA2G5P39877 138 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NNMTP40261 264 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CASP3P42574 277 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 TECP42680 631 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PTGER3P43115 390 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CRATP43155 626 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NAMPTP43490 491 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SOX9P48436 509 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 NDST2P52849 883 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PKNOX1P55347 436 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 TPTEP56180 551 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MBTD1Q05BQ5 628 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SLC34A1Q06495 639 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 DLX2Q07687 328 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ILF3Q12906 894 aaKnown RBP eCLIP7.37□□□□□ -1.23
HDAC3-216ENST00000523088 TSPAN31Q12999 210 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 GPS1Q13098 491 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 CAPSQ13938 189 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PNLIPRP3Q17RR3 467 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 DCAF4L1Q3SXM0 396 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 MOGAT2Q3SYC2 334 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SFRP5Q5T4F7 317 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ATF7IP2Q5U623 682 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 KLHDC7AQ5VTJ3 777 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 UGT3A1Q6NUS8 523 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 ZCCHC12Q6PEW1 402 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 PLEKHG7Q6ZR37 379 aa7.37□□□□□ -1.23
HDAC3-216ENST00000523088 SSX9Q7RTT3 188 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms