RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ACADLP28330 430 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 FOXN2P32314 431 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 SHISA6Q6ZSJ9 500 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 KIAA1328Q86T90 577 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 PRUNE1Q86TP1 453 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 VRK3Q8IV63 474 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 KLHDC8BQ8IXV7 354 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 METTL27Q8N6F8 245 aaPredicted RBP14.87□□□□□ -0.03
MRPS28-209ENST00000522987 LRRC57Q8N9N7 239 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 LKAAEAR1Q8TD35 194 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 PNPLA2Q96AD5 504 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 SNRNP40Q96DI7 357 aaKnown RBP14.87□□□□□ -0.03
MRPS28-209ENST00000522987 TCTN2Q96GX1 697 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 IL17FQ96PD4 163 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 GBP5Q96PP8 586 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 PPP1R2P1Q96PQ5 205 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 SMAD5Q99717 465 aaKnown RBP14.87□□□□□ -0.03
MRPS28-209ENST00000522987 FEZ2Q9UHY8 353 aaPredicted RBP14.87□□□□□ -0.03
MRPS28-209ENST00000522987 AMFRQ9UKV5 643 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 PCDHGB7Q9Y5F8 929 aa14.87□□□□□ -0.03
MRPS28-209ENST00000522987 SLC5A10A0PJK1 596 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 GOLGA6L9A6NEM1 432 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 IQCF5A8MTL0 148 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 H3BMH7 237 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 PEX12O00623 359 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 AP2A2O94973 939 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 IPO7O95373 1038 aaKnown RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 AP2A1O95782 977 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 GOT2P00505 430 aaKnown RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 MSL3P1P0C860 447 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 MAGP20916 626 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 ALAS2P22557 587 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 GRIA1P42261 906 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 GRIA3P42263 894 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 NSG1P42857 185 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 DCDP81605 110 aaKnown RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 NKAIN1Q4KMZ8 207 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 DCAF10Q5QP82 559 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 VWA5B1Q5TIE3 1220 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 ZNF787Q6DD87 383 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 RHBDD2Q6NTF9 364 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 PEX26Q7Z412 305 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 PPP1R32Q7Z5V6 425 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 LDB1Q86U70 411 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 TMTC1Q8IUR5 882 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 TBC1D21Q8IYX1 336 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 KRT222Q8N1A0 295 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 GALNT16Q8N428 558 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 DTWD1Q8N5C7 304 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 DNAAF3Q8N9W5 541 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 CLEC1AQ8NC01 280 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 HDAC10Q969S8 669 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■■■■■ 54.9
MRPS28-209ENST00000522987 ZNF778Q96MU6 729 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 DPH2Q9BQC3 489 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 SLC29A3Q9BZD2 475 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 P4HTMQ9NXG6 502 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 TSR3Q9UJK0 312 aaKnown RBP14.86□□□□□ -0.03
MRPS28-209ENST00000522987 CSAG2Q9Y5P2 127 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 CROCCQ5TZA2 2017 aa14.86□□□□□ -0.03
MRPS28-209ENST00000522987 KRT87PA6NCN2 255 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 MROH6A6NGR9 719 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 UMODP07911 640 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 OR56A5P0C7T3 313 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 MCM3P25205 808 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 ZNF75DP51815 510 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 HSPA14Q0VDF9 509 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 SEMA3AQ14563 771 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 ITIH4Q14624 930 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 SSPNQ14714 243 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 CYP2A13Q16696 494 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 TTLL10Q6ZVT0 673 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 IQCKQ8N0W5 287 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 DNAJC22Q8N4W6 341 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 OR5K2Q8NHB8 316 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 INPP5DQ92835 1189 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 RANBP9Q96S59 729 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 DESI2Q9BSY9 194 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 NDC1Q9BTX1 674 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 DHRS4Q9BTZ2 278 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 ILKAPQ9H0C8 392 aaPredicted RBP14.85□□□□□ -0.03
MRPS28-209ENST00000522987 ZNF552Q9H707 407 aaPredicted RBP14.85□□□□□ -0.03
MRPS28-209ENST00000522987 SLC22A11Q9NSA0 550 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 PLCL2Q9UPR0 1127 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 AP1M2Q9Y6Q5 423 aa14.85□□□□□ -0.03
MRPS28-209ENST00000522987 IFNB1P01574 187 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 ETS1P14921 441 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 PKLRP30613 574 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 CCR7P32248 378 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 GLRBP48167 497 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 MYBPC3Q14896 1274 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 HIF1AQ16665 826 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 KCTD19Q17RG1 926 aaPredicted RBP14.84□□□□□ -0.03
MRPS28-209ENST00000522987 P3H1Q32P28 736 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 LYPLAL1Q5VWZ2 237 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 PPP1R21Q6ZMI0 780 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 LINC01555Q8NAE3 123 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
MRPS28-209ENST00000522987 OR13J1Q8NGT2 312 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms