RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HMGCS1Q01581 520 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 FOXM1Q08050 763 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 TLDC1Q6P9B6 456 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZFAND4Q86XD8 727 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 RGL4Q8IZJ4 473 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 L3MBTL4Q8NA19 623 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 LRRC58Q96CX6 371 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF514Q96K75 400 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 CCDC138Q96M89 665 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 RSPH9Q9H1X1 276 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 ATXN10Q9UBB4 475 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 ABCD2Q9UBJ2 740 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 GULP1Q9UBP9 304 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 LEF1Q9UJU2 399 aaPredicted RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 SNX6Q9UNH7 406 aa18■□□□□ 0.47
TRAPPC9-210ENST00000521667 EIF3LQ9Y262 564 aaKnown RBP18■□□□□ 0.47
TRAPPC9-210ENST00000521667 DYTNA2CJ06 578 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ASPDHA6ND91 283 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 H3BM21 787 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 PDHA2P29803 388 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 TRAP1Q12931 704 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 CST6Q15828 149 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 MAP7D1Q3KQU3 841 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 HABP4Q5JVS0 413 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZFP1Q6P2D0 407 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF513Q8N8E2 541 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 NAF1Q96HR8 494 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 RSRC1Q96IZ7 334 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 MAGEB10Q96LZ2 347 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ACTL8Q9H568 366 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 LRTM1Q9HBL6 345 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 EPS15L1Q9UBC2 864 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 DOCK8Q8NF50 2099 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ANKRD28O15084 1053 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 MID1O15344 667 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 VEGFDO43915 354 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 RNASEH1O60930 286 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 BDKRB1P46663 353 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 GALK1P51570 392 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ATXN3P54252 364 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 MRPS22P82650 360 aaKnown RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 CAMK2GQ13555 558 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 NFYCQ13952 458 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 TIGD2Q4W5G0 525 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 CMPK2Q5EBM0 449 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 CFAP206Q8IYR0 622 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 AADATQ8N5Z0 425 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 FOXJ1Q92949 421 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 LINC00615Q96LM1 132 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 PCDHAC1Q9H158 963 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 TTYH1Q9H313 450 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 ELOVL6Q9H5J4 265 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 CLDND1Q9NY35 253 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 STOX2Q9P2F5 926 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 MCM8Q9UJA3 840 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 PSMD13Q9UNM6 376 aa17.99■□□□□ 0.47
TRAPPC9-210ENST00000521667 NPC1O15118 1278 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 PDYNP01213 254 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 JAK1P23458 1154 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 CAPRIN1Q14444 709 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 TLR1Q15399 786 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 CCSMST1Q4G0I0 132 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 PAGE3Q5JUK9 113 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 AGBL4Q5VU57 503 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 AGTRAPQ6RW13 159 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 CACUL1Q86Y37 369 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SELENOMQ8WWX9 145 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 MTFMTQ96DP5 389 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 HIC2Q96JB3 615 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ASIC5Q9NY37 505 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 GPR34Q9UPC5 381 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 NME4O00746 187 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 AP1G1O43747 822 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SEC22BO75396 215 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ADH1BP00325 375 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ACADSP16219 412 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF8P17098 575 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ATP6V1C1P21283 382 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC6A2P23975 617 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 HALP42357 657 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 MTHFRP42898 656 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 TNFRSF4P43489 277 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 CCR3P51677 355 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 TAS2R38P59533 333 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC44A4Q53GD3 710 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ADAMTSL4Q6UY14 1074 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 MTSS1LQ765P7 747 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 THOC6Q86W42 341 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SPATA24Q86W54 205 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ZNF547Q8IVP9 402 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 SLC15A3Q8IY34 581 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 KLHDC8AQ8IYD2 350 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 PLA2G15Q8NCC3 412 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 ACPTQ9BZG2 426 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 C1orf109Q9NX04 203 aa17.98■□□□□ 0.47
TRAPPC9-210ENST00000521667 C17orf113A0A1B0GUU1 675 aa17.97■□□□□ 0.47
TRAPPC9-210ENST00000521667 GRXCR2A6NFK2 248 aa17.97■□□□□ 0.47
TRAPPC9-210ENST00000521667 IFRD1O00458 451 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC9-210ENST00000521667 UGDHO60701 494 aa17.97■□□□□ 0.47
TRAPPC9-210ENST00000521667 PRAMEF4O60810 478 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms