RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 IFNB1P01574 187 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 CTSBP07858 339 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 GNLYP22749 145 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 PEBP1P30086 187 aaKnown RBP18.94■□□□□ 0.62
PABPC1-215ENST00000520804 OTX2P32243 289 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 CCR7P32248 378 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 CSE1LP55060 971 aaKnown RBP18.94■□□□□ 0.62
PABPC1-215ENST00000520804 KIR2DS3Q14952 304 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 DNAJC21Q5F1R6 531 aaKnown RBP18.94■□□□□ 0.62
PABPC1-215ENST00000520804 SEL1L2Q5TEA6 688 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 C1orf189Q5VU69 101 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 MLIPQ5VWP3 458 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 SLC22A15Q8IZD6 547 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 DNAJC22Q8N4W6 341 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 OR6P1Q8NGX9 317 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 SGSM3Q96HU1 749 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 AP1M1Q9BXS5 423 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 CASS4Q9NQ75 786 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 GPR83Q9NYM4 423 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 ZNF148Q9UQR1 794 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 CDYLQ9Y232 598 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 FER1L5A0AVI2 2057 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 LRRK2Q5S007 2527 aa18.94■□□□□ 0.62
PABPC1-215ENST00000520804 SEC16AO15027 2179 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 NAV2Q8IVL1 2488 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 PKLRP30613 574 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 RAB28P51157 221 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 DCDP81605 110 aaKnown RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 SEMA3AQ14563 771 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 SSPNQ14714 243 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 FASTKD1Q53R41 847 aaKnown RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 JMJD6Q6NYC1 403 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 TLDC1Q6P9B6 456 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 NLRP9Q7RTR0 991 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 PRUNE1Q86TP1 453 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 SLC13A5Q86YT5 568 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 ZNF655Q8N720 491 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 PEX13Q92968 403 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 IP6K3Q96PC2 410 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 SMAD5Q99717 465 aaKnown RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 CARD6Q9BX69 1037 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 TSSK1BQ9BXA7 367 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 RAB6BQ9NRW1 208 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 IFT80Q9P2H3 777 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 GPN3Q9UHW5 284 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-215ENST00000520804 SRPK3Q9UPE1 567 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 PLCL2Q9UPR0 1127 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 TCAF1Q9Y4C2 921 aa18.93■□□□□ 0.62
PABPC1-215ENST00000520804 BLACEA4D250 179 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 GPC4O75487 556 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 CD63P08962 238 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 ETS1P14921 441 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 PPARGP37231 505 aaPredicted RBP18.92■□□□□ 0.62
PABPC1-215ENST00000520804 PRAMEP78395 509 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 HSPA14Q0VDF9 509 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 KYNUQ16719 465 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 MRGPREQ86SM8 312 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 VRK3Q8IV63 474 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 FAM20CQ8IXL6 584 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 RBMXL3Q8N7X1 1067 aaKnown RBP18.92■□□□□ 0.62
PABPC1-215ENST00000520804 Q8NA96 180 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 LKAAEAR1Q8TD35 194 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 C1orf54Q8WWF1 131 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 ASZ1Q8WWH4 475 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 MENTQ9BUN1 341 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 TXLNGQ9NUQ3 528 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 DHCR7Q9UBM7 475 aaKnown RBP18.92■□□□□ 0.62
PABPC1-215ENST00000520804 NDOR1Q9UHB4 597 aa18.92■□□□□ 0.62
PABPC1-215ENST00000520804 PTRH2Q9Y3E5 179 aaKnown RBP18.92■□□□□ 0.62
PABPC1-215ENST00000520804 IQCF5A8MTL0 148 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 APRTP07741 180 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 CD9P21926 228 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 FOLR3P41439 243 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 SNX1Q13596 522 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 INPP5JQ15735 1006 aaPredicted RBP18.91■□□□□ 0.62
PABPC1-215ENST00000520804 AARS2Q5JTZ9 985 aaKnown RBP18.91■□□□□ 0.62
PABPC1-215ENST00000520804 SLC6A19Q695T7 634 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 MRPL14Q6P1L8 145 aaKnown RBP18.91■□□□□ 0.62
PABPC1-215ENST00000520804 GAS2L3Q86XJ1 694 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 LINC01555Q8NAE3 123 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 OR2Y1Q8NGV0 311 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 UBE2Q2Q8WVN8 375 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 PNPLA2Q96AD5 504 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 FER1L6-AS2Q96M78 137 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 NDC1Q9BTX1 674 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 MFRPQ9BY79 579 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 SLAMF7Q9NQ25 335 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 IRAK4Q9NWZ3 460 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 EURLQ9NYK6 297 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 LUZP4Q9P127 313 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 PAK5Q9P286 719 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 C5AR2Q9P296 337 aa18.91■□□□□ 0.62
PABPC1-215ENST00000520804 SNRNP200O75643 2136 aaKnown RBP18.91■□□□□ 0.62
PABPC1-215ENST00000520804 PEX12O00623 359 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 RPN2P04844 631 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 APOA4P06727 396 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 MAGP20916 626 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 RAPSNQ13702 412 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 GRB7Q14451 532 aa18.9■□□□□ 0.62
PABPC1-215ENST00000520804 NKAIN1Q4KMZ8 207 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms