RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 METTL8Q9H825 291 aaKnown RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 SMURF1Q9HCE7 757 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 DMAC2Q9NW81 257 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 EVLQ9UI08 416 aaPredicted RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 SAMHD1Q9Y3Z3 626 aaKnown RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 J3QRK9 145 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 E2F3O00716 465 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 PDCD5O14737 125 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 NRP2O60462 931 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 LIMK2P53671 638 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 CDH13P55290 713 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 YBEYP58557 167 aaPredicted RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 DEFA6Q01524 100 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 NDUFA9Q16795 377 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 SPRYD7Q5W111 196 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 CHSY3Q70JA7 882 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 ANKRD53Q8N9V6 530 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 FBXL8Q96CD0 374 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 TMEM109Q9BVC6 243 aa11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 RIOK2Q9BVS4 552 aaKnown RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 YTHDF1Q9BYJ9 559 aaKnown RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 EIF2B3Q9NR50 452 aaKnown RBP11.9□□□□□ -0.5
ERGIC1-208ENST00000520399 ITM2AO43736 263 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 UGT2B11O75310 529 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 APODP05090 189 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 MPP1Q00013 466 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 KLF10Q13118 480 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 CPTPQ5TA50 214 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 KCTD8Q6ZWB6 473 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 CADM1Q9BY67 442 aaKnown RBP11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 PPA2Q9H2U2 334 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 IFT80Q9P2H3 777 aaPredicted RBP11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.51
ERGIC1-208ENST00000520399 H0Y858 1186 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 H3BM21 787 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 LRIG2O94898 1065 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PVALBP20472 110 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ITPKAP23677 461 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FASTKD3Q14CZ7 662 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ALG10Q5BKT4 473 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 CXorf57Q6NSI4 855 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 RFWD3Q6PCD5 774 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FIP1L1Q6UN15 594 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 POC1BQ8TC44 478 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 BRD7Q9NPI1 651 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 CD93Q9NPY3 652 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ELOVL2Q9NXB9 296 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 SALL4Q9UJQ4 1053 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ARL5AQ9Y689 179 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 A0A075B6Q4 140 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 RHPN2P1A8MT19 583 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PRMT5O14744 637 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TLX3O43711 291 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 VNN1O95497 513 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FGBP02675 491 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC6A2P23975 617 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PRDX6P30041 224 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 HSD17B2P37059 387 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PITPNAQ00169 270 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 CCNYL2Q5T2Q4 361 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 EMC10Q5UCC4 262 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 CCDC71Q8IV32 467 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 MUC13Q9H3R2 512 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 LRTM1Q9HBL6 345 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ALKBH4Q9NXW9 302 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TIMM8BQ9Y5J9 83 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 M0R129 80 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PEX10O60683 326 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 RBM34P42696 430 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 REP15Q6BDI9 236 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TAPT1Q6NXT6 567 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FUT10Q6P4F1 479 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FRRS1Q6ZNA5 592 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TMEM17Q86X19 198 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 GPR135Q8IZ08 494 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 HCN3Q9P1Z3 774 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 EGFL7Q9UHF1 273 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ALG5Q9Y673 324 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 EIF3FO00303 357 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 C22orf31O95567 290 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TRBC1P01850 177 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 IL7P13232 177 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ADNP2Q6IQ32 1131 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ANKS1BQ7Z6G8 1248 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 CPSF7Q8N684 471 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 OR10G6Q8NH81 332 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 SNX33Q8WV41 574 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 C12orf43Q96C57 262 aaKnown RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 GAL3ST1Q99999 423 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms