RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NSMCE3Q96MG7 304 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 VPS35Q96QK1 796 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 BPIFA3Q9BQP9 254 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF559Q9BR84 538 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CNPY3Q9BT09 278 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NDC1Q9BTX1 674 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SPATA16Q9BXB7 569 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NAA15Q9BXJ9 866 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 TDRD1Q9BXT4 1180 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 MAGEB5Q9BZ81 275 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CHRNA10Q9GZZ6 450 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RNF32Q9H0A6 362 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RAB6CQ9H0N0 254 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 GOLPH3LQ9H4A5 285 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 KIR3DX1Q9H7L2 352 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 WDR54Q9H977 334 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RRAGDQ9NQL2 400 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 SEPT11Q9NVA2 429 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 IFT80Q9P2H3 777 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 FBXL4Q9UKA2 621 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 NXT1Q9UKK6 140 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 POMT2Q9UKY4 750 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 AP4E1Q9UPM8 1137 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ZKSCAN5Q9Y2L8 839 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 MEMO1Q9Y316 297 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 MRPS2Q9Y399 296 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 HEBP2Q9Y5Z4 205 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 COLEC10Q9Y6Z7 277 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 CUBNO60494 3623 aa4.72□□□□□ -1.65
SDCBP-207ENST00000520168 PHF3Q92576 2039 aaKnown RBP4.72□□□□□ -1.65
SDCBP-207ENST00000520168 ABCA4P78363 2273 aa4.71□□□□□ -1.65
SDCBP-207ENST00000520168 INTS1Q8N201 2190 aaKnown RBP4.71□□□□□ -1.65
SDCBP-207ENST00000520168 CSPG4Q6UVK1 2322 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 GSAPA4D1B5 854 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 IDSB3KWA1 339 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ANKRD66B4E2M5 251 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CCP110O43303 1012 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PRPSAP2O60256 369 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PRAMEF2O60811 474 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CDK14O94921 469 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PEX11BO96011 259 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CYP1A1P04798 512 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 UMODP07911 640 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 MMEP08473 750 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PDHA1P08559 390 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 MTHFD1P11586 935 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ATP1A3P13637 1013 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 HLA-DPA1P20036 260 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 UGT1A4P22310 534 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CDC25BP30305 580 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 KPNA2P52292 529 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 DRG2P55039 364 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 GP2P55259 537 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CDR2Q01850 454 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 XRCC4Q13426 336 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SLC5A12Q1EHB4 618 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PRAMEF17Q5VTA0 474 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PLEKHA7Q6IQ23 1121 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TIGD7Q6NT04 549 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PPP1R2P3Q6NXS1 205 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TLDC1Q6P9B6 456 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 RFLNAQ6ZTI6 216 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 AMZ2Q86W34 360 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TRAPPC5Q8IUR0 188 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF547Q8IVP9 402 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PGBD5Q8N414 524 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TTC30BQ8N4P2 665 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 GPR150Q8NGU9 434 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 DLG3Q92796 817 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 THOC3Q96J01 351 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TTC25Q96NG3 672 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TAAR6Q96RI8 345 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 WDR24Q96S15 920 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SRPK1Q96SB4 655 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 C11orf70Q9BRQ4 267 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 NUP85Q9BW27 656 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ADGRE3Q9BY15 652 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PITPNM3Q9BZ71 974 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TSPYL1Q9H0U9 437 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SLC26A1Q9H2B4 701 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 DHX35Q9H5Z1 703 aaKnown RBP4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ZFYVE1Q9HBF4 777 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 PCDH9Q9HC56 1237 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SIX2Q9NPC8 291 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SEMA3GQ9NS98 782 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 TXLNGQ9NUQ3 528 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.71□□□□□ -1.664e-7■■■■□ 23.7
SDCBP-207ENST00000520168 ADAM22Q9P0K1 906 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 STOML1Q9UBI4 398 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SLC23A2Q9UGH3 650 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 SH3BGRL2Q9UJC5 107 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CDC23Q9UJX2 597 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ACSL5Q9ULC5 683 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 CTNND2Q9UQB3 1225 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 WDR37Q9Y2I8 494 aa4.71□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF835Q9Y2P0 537 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms