RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 IL33O95760 270 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 PIGRP01833 764 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 PCNAP12004 261 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 TCF3P15923 654 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 VCAM1P19320 739 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 RDXP35241 583 aaKnown RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 RPS10P46783 165 aaKnown RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 BTKQ06187 659 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 CCDC14Q49A88 953 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 PCOTHQ58A44 107 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 RAET1LQ5VY80 246 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SAXO2Q658L1 398 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 C3P1Q6ZMU1 363 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 DENND5BQ6ZUT9 1274 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF554Q86TJ5 538 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SUGP1Q8IWZ8 645 aaKnown RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 GPALPP1Q8IXQ4 340 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 KIAA2013Q8IYS2 634 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZBTB2Q8N680 514 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 DNAAF1Q8NEP3 725 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 C9orf43Q8TAL5 461 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 PDXPQ96GD0 296 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 MYADMQ96S97 322 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 COLEC11Q9BWP8 271 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 MAGEB5Q9BZ81 275 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPNS1Q9H2V7 528 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 HPS4Q9NQG7 708 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ENTPD7Q9NQZ7 604 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 OLFML3Q9NRN5 406 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 THAP1Q9NVV9 213 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC52A1Q9NWF4 448 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 SLC5A4Q9NY91 659 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 CRLS1Q9UJA2 301 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ITGA11Q9UKX5 1188 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 OGDHLQ9ULD0 1010 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 CNPY2Q9Y2B0 182 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 NCOR2Q9Y618 2525 aa-1.28□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF541Q9H0D2 1346 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGLV4-69A0A075B6H9 119 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGLV1-50A0A075B6I6 118 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGHV3-20A0A0C4DH32 117 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 AREL1O15033 823 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ADAM12O43184 909 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 HOXC11O43248 304 aaPredicted RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 THAP12O43422 761 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 CDC45O75419 566 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 KRT33AO76009 404 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 NDST3O95803 873 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 CYP21A2P08686 494 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ACP5P13686 325 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 PTPN2P17706 415 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 IGFBP3P17936 291 aaPredicted RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 AOC1P19801 751 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 TNFRSF4P43489 277 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 CTCFP49711 727 aaPredicted RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 CCR3P51677 355 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ZBED6P86452 979 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 IL9RQ01113 521 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 SQLEQ14534 574 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 RPS6KA1Q15418 735 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 MAPKAPK3Q16644 382 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 LETM2Q2VYF4 491 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 LRRC24Q50LG9 513 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 NHSL2Q5HYW2 709 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 SH2D4BQ5SQS7 431 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 GARNL3Q5VVW2 1013 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 MOB3CQ70IA8 216 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 RASGRP2Q7LDG7 609 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 PRSS45Q7RTY3 260 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ZER1Q7Z7L7 766 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ERI1Q8IV48 349 aaKnown RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 GMCL1P1Q8NEA9 526 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 OR1L3Q8NH93 324 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 AENQ8WTP8 325 aaKnown RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 SMPDL3BQ92485 455 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 APBB2Q92870 758 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 HNRNPABQ99729 332 aaKnown RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 RIOK1Q9BRS2 568 aaKnown RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 THAP2Q9H0W7 228 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 ZNF287Q9HBT7 754 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 A4GALTQ9NPC4 353 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 SDR39U1Q9NRG7 319 aaPredicted RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 HELLSQ9NRZ9 838 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 HACL1Q9UJ83 578 aa-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 CFAP65Q6ZU64 1925 aaKnown RBP-1.29□□□□□ -2.62
RNU6-539P-201ENST00000516665 FRAS1Q86XX4 4008 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 TRBV6-6A0A0A6YYG2 114 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 PDHXO00330 501 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 HS3ST1O14792 307 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 HBP1O60381 514 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 TSPAN3O60637 253 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 GPX5O75715 221 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 RETP07949 1114 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 IFI30P13284 250 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 CA6P23280 308 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 AKT1P31749 480 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 KIR2DS2P43631 304 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 RECQLP46063 649 aaPredicted RBP-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 TRPC1P48995 793 aa-1.3□□□□□ -2.62
RNU6-539P-201ENST00000516665 ARSEP51690 589 aa-1.3□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms