RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 TRNAU1APQ9NX07 287 aaKnown RBP3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 COMMD8Q9NX08 183 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TUBA8Q9NY65 449 aaPredicted RBP3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SLCO1C1Q9NYB5 712 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 B3GAT1Q9P2W7 334 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 IL36RNQ9UBH0 155 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZNHIT2Q9UHR6 403 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SH3BGRL2Q9UJC5 107 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KCNK6Q9Y257 313 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ITM2BQ9Y287 266 aa3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ARHGEF17Q96PE2 2063 aaPredicted RBP3.11□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RPS10-NUDT3A0A1W2PQS6 291 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SLC9B1P1A6NJY1 282 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 INAFM1C9JVW0 142 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 K7EPI3 171 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SPRY3O43610 288 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SMPD2O60906 423 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SOCS5O75159 536 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ATP6AP2O75787 350 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 WDPCPO95876 746 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SYF2O95926 243 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 STAG3L1P0CL83 205 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MYL6BP14649 208 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MYOD1P15172 320 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 S1PR1P21453 382 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 AHCYP23526 432 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 AMTP48728 403 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PLCD1P51178 756 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SMSP52788 366 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ELLP55199 621 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ISL1P61371 349 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MAT1AQ00266 395 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 DMPKQ09013 629 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZNF415Q09FC8 603 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KLHL30Q0D2K2 578 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RBMS2Q15434 407 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 OASLQ15646 514 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MAPK11Q15759 364 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 NPTX1Q15818 432 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PTGISQ16647 500 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MCMDC2Q4G0Z9 681 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SPOUT1Q5T280 376 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 FAM46CQ5VWP2 391 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KLC3Q6P597 504 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 C1orf186Q6ZWK4 172 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PIP4P1Q86T03 277 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZNF410Q86VK4 478 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TMPRSS12Q86WS5 348 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 BMPERQ8N8U9 685 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 AMER3Q8N944 861 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 THAP8Q8NA92 274 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZBTB44Q8NCP5 570 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PIGTQ969N2 578 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 COQ8BQ96D53 544 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 THOC1Q96FV9 657 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 OXNAD1Q96HP4 312 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 EPSTI1Q96J88 318 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 C3orf30Q96M34 536 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 C16orf45Q96MC5 204 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZNF560Q96MR9 790 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MYCBPQ99417 103 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 S1PR5Q9H228 398 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ACKR4Q9NPB9 350 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SERINC1Q9NRX5 453 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ZBTB40Q9NUA8 1239 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 HMG20BQ9P0W2 317 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TXNDC16Q9P2K2 825 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 SPASTQ9UBP0 616 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 LRWD1Q9UFC0 647 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ING1Q9UK53 422 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 KCNS2Q9ULS6 477 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 FZD10Q9ULW2 581 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 WDR83OSQ9Y284 106 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 STRAPQ9Y3F4 350 aaKnown RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ATP6V0A2Q9Y487 856 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 YIPF1Q9Y548 306 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 DMRT1Q9Y5R6 373 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PTGDR2Q9Y5Y4 395 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 HS3ST3B1Q9Y662 390 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PCDH11YQ9BZA8 1340 aa3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 COL11A2P13942 1736 aaPredicted RBP3.1□□□□□ -1.91
SCARNA15.2-201ENST00000516409 IGLV5-39A0A0G2JS06 123 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 LINC01553A4QN01 128 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CACNB4O00305 520 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 DVL1O14640 695 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TNFRSF13BO14836 293 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RFPL2O75678 378 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 LETM1O95202 739 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 LDLRP01130 860 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 GHRP10912 638 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 POLR2CP19387 275 aaPredicted RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CBLP22681 906 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 RPA1P27694 616 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 PIK3R1P27986 724 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 CDKN1AP38936 164 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 TMPOP42166 694 aaKnown RBP3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 MMP15P51511 669 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 BRWD1-AS2P59051 145 aa3.09□□□□□ -1.91
SCARNA15.2-201ENST00000516409 ABATP80404 500 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms