RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 FAM163BP0C2L3 166 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 PRR23D2P0DMB1 279 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 GRB14Q14449 540 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 CYP2A13Q16696 494 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 USP39Q53GS9 565 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 OTUD1Q5VV17 481 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 LYPLAL1Q5VWZ2 237 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SMYD5Q6GMV2 418 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 ZNF544Q6NX49 715 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 DTWD1Q8N5C7 304 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 RHEBL1Q8TAI7 183 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 FRS2Q8WU20 508 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 GTPBP3Q969Y2 492 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 KCNC2Q96PR1 638 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 C1QTNF7Q9BXJ2 289 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 AASSQ9UDR5 926 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 OR2AG2A6NM03 316 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 IDH3BO43837 385 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 CCNKO75909 580 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 OPN1SWP03999 348 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 HTR1EP28566 365 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 TMBIM6P55061 237 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 CDH12P55289 794 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SMARCB1Q12824 385 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 DENND5AQ6IQ26 1287 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 BORAQ6PGQ7 559 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 MTSS1LQ765P7 747 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 EIF3MQ7L2H7 374 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 OR4A15Q8NGL6 344 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 FUBP1Q96AE4 644 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 BRD9Q9H8M2 597 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 ERVK-18Q9QC07 812 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SCML2Q9UQR0 700 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 A0A0U1RQF3 1178 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 A0A1B0GVM2 712 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 MYL12BO14950 172 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 AP1G1O43747 822 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 CATP04040 527 aaKnown RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 GTDC1Q4AE62 458 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SCD5Q86SK9 330 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 GATAD2AQ86YP4 633 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 SNX29P2Q8IUI4 249 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 CNTN4Q8IWV2 1026 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 ATL1Q8WXF7 558 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 UBE2E3Q969T4 207 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 ISL2Q96A47 359 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 KCNS3Q9BQ31 491 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 TCF25Q9BQ70 676 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 TBCCD1Q9NVR7 557 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 NLE1Q9NVX2 485 aaPredicted RBP10.02□□□□□ -0.81
SMG7-215ENST00000515829 SPG21Q9NZD8 308 aa10.02□□□□□ -0.81
SMG7-215ENST00000515829 EVPLQ92817 2033 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 MAGEB17A8MXT2 336 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 H0YAE9 185 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GUCY1B2O75343 617 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 SBK3P0C264 359 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 AGXTP21549 392 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 SKP1P63208 163 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 MBOAT1Q6ZNC8 495 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 PTCHD4Q6ZW05 846 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GLB1L3Q8NCI6 653 aaPredicted RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 MARCH7Q9H992 704 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 FAM118AQ9NWS6 357 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 TOR4AQ9NXH8 423 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 KLHL20Q9Y2M5 609 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 COL5A3P25940 1745 aaPredicted RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 STX16O14662 325 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GPR39O43194 453 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 DUSP11O75319 330 aaKnown RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 MTX2O75431 263 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GKP32189 559 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 ERVPABLB-1P60509 514 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 SLC36A3Q495N2 470 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 NT5C3BQ969T7 300 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 TTPALQ9BTX7 342 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 ACAT2Q9BWD1 397 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 SGK2Q9HBY8 427 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 RPS6KB2Q9UBS0 482 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 NUP205Q92621 2012 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 FUOMA2VDF0 154 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 MITFO75030 526 aaPredicted RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 PABPC1P11940 636 aaKnown RBP10.01□□□□□ -0.81
SMG7-215ENST00000515829 ELNP15502 786 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 ARNTP27540 789 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 HNF4AP41235 474 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 NAE1Q13564 534 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 NHSL2Q5HYW2 709 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 NIPAL1Q6NVV3 410 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 SLC34A3Q8N130 599 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 UBE2J2Q8N2K1 259 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 TTC9BQ8N6N2 239 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 GPR78Q96P69 363 aa10.01□□□□□ -0.81
SMG7-215ENST00000515829 DCSTAMPQ9H295 470 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms