RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 FOXM1Q08050 763 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 AGERQ15109 404 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 RFTN2Q52LD8 501 aaPredicted RBP14.56□□□□□ -0.08
VCAN-211ENST00000513984 ICE2Q659A1 982 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 CYP20A1Q6UW02 462 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 LAYNQ6UX15 382 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 ZNF547Q8IVP9 402 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 MINDY1Q8N5J2 469 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 RNF148Q8N7C7 305 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 SLC45A3Q96JT2 553 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 ATG10Q9H0Y0 220 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 GID8Q9NWU2 228 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 STOX2Q9P2F5 926 aaPredicted RBP14.56□□□□□ -0.08
VCAN-211ENST00000513984 ABCD2Q9UBJ2 740 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 POLR3HQ9Y535 204 aaPredicted RBP14.56□□□□□ -0.08
VCAN-211ENST00000513984 LRRC42Q9Y546 428 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 PCM1Q15154 2024 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 ASPDHA6ND91 283 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ANHXE9PGG2 379 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 UGDHO60701 494 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 G6PDP11413 515 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ZNF8P17098 575 aaPredicted RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 ITPKAP23677 461 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 IL12AP29459 219 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 BDKRB1P46663 353 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 RPL38P63173 70 aaKnown RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 PLOD1Q02809 727 aaPredicted RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 PRKG2Q13237 762 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 CPSF6Q16630 551 aaKnown RBP eCLIP14.55□□□□□ -0.08
VCAN-211ENST00000513984 SAMD4BQ5PRF9 694 aaKnown RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 IL23RQ5VWK5 629 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ZFAND4Q86XD8 727 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 RGL4Q8IZJ4 473 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 PLA2G15Q8NCC3 412 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 HIPK4Q8NE63 616 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 CSGALNACT1Q8TDX6 532 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ACTL8Q9H568 366 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SNX6Q9UNH7 406 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 F5P12259 2224 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SERTM1A2A2V5 107 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 PRORSD1PA6NEY8 169 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 GRXCR2A6NFK2 248 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 IGLON5A6NGN9 336 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 NPIPB8E9PQR5 432 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 H3BNX3 289 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 MAP3K7O43318 606 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 PRAMEF4O60810 478 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 JAK1P23458 1154 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 TIE1P35590 1138 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 GNPDA1P46926 289 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SLC7A2P52569 658 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 HMGCS1Q01581 520 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 PCDH1Q08174 1060 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 TRIM25Q14258 630 aaKnown RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 IMPG1Q17R60 797 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 PRAMEF9Q5VWM5 478 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ZNF776Q68DI1 518 aaPredicted RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 PNCKQ6P2M8 343 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 AGTRAPQ6RW13 159 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 C11orf96Q7Z7L8 435 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 DHDDSQ86SQ9 333 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 GALNT13Q8IUC8 556 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 CFAP206Q8IYR0 622 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SMRP1Q8NCR6 262 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 OR2L2Q8NH16 312 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 HM13Q8TCT9 377 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 FOXJ1Q92949 421 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 NECTIN4Q96NY8 510 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SLC39A3Q9BRY0 314 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 ZNF576Q9H609 170 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 LRTM1Q9HBL6 345 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 NMRK1Q9NWW6 199 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 SERGEFQ9UGK8 458 aa14.55□□□□□ -0.08
VCAN-211ENST00000513984 LEF1Q9UJU2 399 aaPredicted RBP14.55□□□□□ -0.08
VCAN-211ENST00000513984 SZT2Q5T011 3432 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 CCDC154A6NI56 674 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 NVLO15381 856 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 C1orf105O95561 183 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 PDYNP01213 254 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 SLC2A4P14672 509 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 JUPP14923 745 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 PRPH2P23942 346 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 IMPA1P29218 277 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 MSX2P35548 267 aaPredicted RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 SEC13P55735 322 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 RPS14P62263 151 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 TRAP1Q12931 704 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 COL19A1Q14993 1142 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 TLR1Q15399 786 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 CCSMST1Q4G0I0 132 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 CMPK2Q5EBM0 449 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 LIPJQ5W064 366 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 RNF111Q6ZNA4 994 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 THOC6Q86W42 341 aaKnown RBP14.54□□□□□ -0.08
VCAN-211ENST00000513984 HEATR4Q86WZ0 1026 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 CACUL1Q86Y37 369 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 HDDC3Q8N4P3 179 aa14.54□□□□□ -0.08
VCAN-211ENST00000513984 OR2T3Q8NH03 318 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms