RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 BTBD16Q32M84 506 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 UBE2UQ5VVX9 321 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 LCN8Q6JVE9 175 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TRIM40Q6P9F5 258 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PIWIL3Q7Z3Z3 882 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 COL21A1Q96P44 957 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 SORT1Q99523 831 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ABCG8Q9H221 673 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ERVK-18Q9QC07 812 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ALS2Q96Q42 1657 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 FADS2P1A8MWK0 482 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MSI1O43347 362 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 KLHL18O94889 574 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 SIX3O95343 332 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CLTBP09497 229 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 SLC2A2P11168 524 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CYP3A5P20815 502 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 HTR2BP41595 481 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MAP2K4P45985 399 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 POM121L1PQ3SYA9 428 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 METTL3Q86U44 580 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TXNDC5Q8NBS9 432 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 OR52J3Q8NH60 311 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF641Q96N77 438 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 IPPKQ9H8X2 491 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 A0A1W2PQH9 124 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 PIGRP01833 764 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CCL5P13501 91 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 ANXA8P13928 327 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 MATN1P21941 496 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 LPOP22079 712 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 ALDH9A1P49189 494 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 PFKPQ01813 784 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 SCRN3Q0VDG4 424 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 ANXA8L1Q5VT79 327 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 STEAP4Q687X5 459 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 NAPRTQ6XQN6 538 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TEPSINQ96N21 525 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 GPR21Q99679 349 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 POLR2J2Q9GZM3 115 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TRIT1Q9H3H1 467 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TFB2MQ9H5Q4 396 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 RABL2BQ9UNT1 228 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TESMINQ9Y4I5 508 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 GON4LQ3T8J9 2241 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 C7orf72A4D263 438 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 FUCA1P04066 466 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 HSD17B1P14061 328 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CLK3P49761 638 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 NDUFV1P49821 464 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 SUZ12Q15022 739 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CCL14Q16627 93 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CYP20A1Q6UW02 462 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 USP30Q70CQ3 517 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CXXC5Q7LFL8 322 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 DBF4BQ8NFT6 615 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 JPH3Q8WXH2 748 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 FIZ1Q96SL8 496 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 DPEP3Q9H4B8 488 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 MINDY3Q9H8M7 445 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 FAM118AQ9NWS6 357 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 AGO1Q9UL18 857 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 C1QTNF3-AMACRE9PGA6 284 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 FPGTO14772 594 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 PLD2O14939 933 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 OR2B3O76000 313 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CES1P23141 567 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 UFM1P61960 85 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 GALNT3Q14435 633 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 USP39Q53GS9 565 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 ANKLE1Q8NAG6 615 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CNIH3Q8TBE1 160 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 CXorf40AQ8TE69 158 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 BTN2A3PQ96KV6 586 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 SLC9A7Q96T83 725 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 SLA2Q9H6Q3 261 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 RNF186Q9NXI6 227 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 TAS2R7Q9NYW3 318 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 EIF3KQ9UBQ5 218 aaKnown RBP11.03□□□□□ -0.64
TCOF1-211ENST00000513346 PCDHB9Q9Y5E1 797 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 NUP98P52948 1817 aa11.03□□□□□ -0.64
TCOF1-211ENST00000513346 PDPK1O15530 556 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 S100A6P06703 90 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 FPR1P21462 350 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 HTR1EP28566 365 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 NIPAL4Q0D2K0 466 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 GARNL3Q5VVW2 1013 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 NANOGP8Q6NSW7 305 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 FUT10Q6P4F1 479 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF438Q7Z4V0 828 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 LIX1Q8N485 282 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 EEF1AKMT1Q8WVE0 214 aa11.02□□□□□ -0.64
TCOF1-211ENST00000513346 REPS1Q96D71 796 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms