RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 CHST11Q9NPF2 352 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 MRPL40Q9NQ50 206 aaKnown RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM140Q9NV12 185 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM51Q9NW97 253 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 HESX1Q9UBX0 185 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 HMGXB4Q9UGU5 601 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 IL36AQ9UHA7 158 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 OR51B4Q9Y5P0 310 aa3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 KLF2Q9Y5W3 355 aaPredicted RBP3.64□□□□□ -1.83
PDLIM5-218ENST00000513341 AKAP9Q99996 3911 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DIDO1Q9BTC0 2240 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF106Q9H2Y7 1883 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 A0A1B0GUH1 482 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ANKUB1A6NFN9 424 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SERINC4A6NH21 518 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 C16orf96A6NNT2 1141 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 LINC00473A8K010 186 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 RHPN2P1A8MT19 583 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 F5H5T6 163 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 AREL1O15033 823 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 POLR1CO15160 346 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CLIC2O15247 247 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 HTRA2O43464 458 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CREG1O75629 220 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CEACAM4O75871 244 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ZRANB2O95218 330 aaKnown RBP eCLIP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 MT-ND3P03897 115 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SETSIPP0DME0 302 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 THRAP10827 490 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 PDGFRAP16234 1089 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NR1D1P20393 614 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NFKBIAP25963 317 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ALDH4A1P30038 563 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ADSLP30566 484 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DLSTP36957 453 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CYP2J2P51589 502 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NDST2P52849 883 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 RAD23BP54727 409 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CDH4P55283 916 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SRP54P61011 504 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ADIGQ0VDE8 80 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 BST2Q10589 180 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 EIF4EBP2Q13542 120 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ERV3-1Q14264 604 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 TWIST1Q15672 202 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CHRNA6Q15825 494 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 KNOP1Q1ED39 458 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ALG11Q2TAA5 492 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SMTNL2Q2TAL5 461 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF260Q3ZCT1 412 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 MAP9Q49MG5 647 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NADK2Q4G0N4 442 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CARD16Q5EG05 197 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC18B1Q6NT16 456 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 RETSATQ6NUM9 610 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 WDR74Q6RFH5 385 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ENPP7Q6UWV6 458 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SCARA5Q6ZMJ2 495 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF66Q6ZN08 573 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DPY19L3Q6ZPD9 716 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 USP45Q70EL2 814 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ARHGAP22Q7Z5H3 698 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 TAF8Q7Z7C8 310 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SETD3Q86TU7 594 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NRSN1Q8IZ57 195 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 LGI2Q8N0V4 545 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 IQCKQ8N0W5 287 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 PCDH20Q8N6Y1 951 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ATP6V0D2Q8N8Y2 350 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ATP11CQ8NB49 1132 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC4A11Q8NBS3 891 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 KIAA1524Q8TCG1 905 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 HCAR2Q8TDS4 363 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 PDCD6IPQ8WUM4 868 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC35F5Q8WV83 523 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 HOXB13Q92826 284 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 TSACCQ96A04 125 aaPredicted RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ISG20Q96AZ6 181 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 MARS2Q96GW9 593 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 EPSTI1Q96J88 318 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 PRMT1Q99873 361 aaKnown RBP3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 APOOQ9BUR5 198 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 FGFBP2Q9BYJ0 223 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 TNMDQ9H2S6 317 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CUEDC2Q9H467 287 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DPEP2Q9H4A9 486 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 RDH14Q9HBH5 336 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 AGPAT4Q9NRZ5 378 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DMAC2Q9NW81 257 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 OCIAD1Q9NX40 245 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 C5AR2Q9P296 337 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 VPS28Q9UK41 221 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 ITGB1BP2Q9UKP3 347 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 TSPAN16Q9UKR8 245 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 INTUQ9ULD6 942 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 NEU2Q9Y3R4 380 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 DAAM1Q9Y4D1 1078 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 SRPRBQ9Y5M8 271 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms