RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ONECUT2O95948 504 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 ALBP02768 609 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 SSTR2P30874 369 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 PRLHRP49683 370 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 WNT3AP56704 352 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 TAS2R40P59535 323 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 SLC9A5Q14940 896 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-204ENST00000513139 INAQ16352 499 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 FAM182AQ5T1J6 154 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 KDELC1Q6UW63 502 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 ISLR2Q6UXK2 745 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 DAAM2Q86T65 1068 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 CPNE8Q86YQ8 564 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 LILRA3Q8N6C8 439 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-204ENST00000513139 DENND1AQ8TEH3 1009 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 NR4A3Q92570 626 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 CCDC120Q96HB5 630 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 RBM41Q96IZ5 413 aaKnown RBP13.4□□□□□ -0.26
SPCS3-204ENST00000513139 VPS50Q96JG6 964 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 NDC1Q9BTX1 674 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 LACRTQ9GZZ8 138 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 UBP1Q9NZI7 540 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 DUSP10Q9Y6W6 482 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 MAP1AP78559 2803 aaPredicted RBP13.4□□□□□ -0.26
SPCS3-204ENST00000513139 GTF3C1Q12789 2109 aa13.4□□□□□ -0.26
SPCS3-204ENST00000513139 CCDC78A2IDD5 438 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 IFRD1O00458 451 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 HCRTR1O43613 425 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 IPO7O95373 1038 aaKnown RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 RALBP11234 206 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 ZFXP17010 805 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 KCNK10P57789 538 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 FOXL2P58012 376 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 MFAP5Q13361 173 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 NOMO1Q15155 1222 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 SLC1A5Q15758 541 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 ZIC1Q15915 447 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 SLC5A12Q1EHB4 618 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 TUBB8Q3ZCM7 444 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 XKRXQ6PP77 449 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 KIRREL2Q6UWL6 708 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 OVCH1Q7RTY7 1134 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 ZNF655Q8N720 491 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 BLOC1S5Q8TDH9 187 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 RAPGEF5Q92565 580 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 DLG3Q92796 817 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 SLC26A1Q9H2B4 701 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 OR52A5Q9H2C5 316 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 SLC22A11Q9NSA0 550 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 UVRAGQ9P2Y5 699 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 HS3ST3B1Q9Y662 390 aa13.39□□□□□ -0.27
SPCS3-204ENST00000513139 ANKHD1Q8IWZ3 2542 aaKnown RBP13.39□□□□□ -0.27
SPCS3-204ENST00000513139 CCL21O00585 134 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 APOL1O14791 398 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 STX7O15400 261 aaKnown RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 PIM1P11309 404 aaPredicted RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 AGAP20933 346 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 PTPN3P26045 913 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 CA7P43166 264 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 GCGRP47871 477 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 RPA4Q13156 261 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 BOP1Q14137 746 aaKnown RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 LCE2DQ5TA82 110 aaPredicted RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 TMEM207Q6UWW9 146 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 GFRALQ6UXV0 394 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 KIAA1328Q86T90 577 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 OR1N1Q8NGS0 311 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 DCUN1D1Q96GG9 259 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 POM121Q96HA1 1249 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 THOC3Q96J01 351 aaKnown RBP13.38□□□□□ -0.27
SPCS3-204ENST00000513139 MRGPRX2Q96LB1 330 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 OR2A14Q96R47 310 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 NRTNQ99748 197 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 ASB8Q9H765 288 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 ABCA2Q9BZC7 2435 aa13.38□□□□□ -0.27
SPCS3-204ENST00000513139 TRGV8A0A0C4DH27 118 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 A0A1B0GX78 115 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
SPCS3-204ENST00000513139 ALOX12BO75342 701 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 SRP72O76094 671 aaKnown RBP13.37□□□□□ -0.27
SPCS3-204ENST00000513139 UGT2B7P16662 529 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 CD68P34810 354 aaPredicted RBP13.37□□□□□ -0.27
SPCS3-204ENST00000513139 SHMT2P34897 504 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 CHRNA4P43681 627 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 ARSFP54793 590 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 MESDQ14696 234 aa13.37□□□□□ -0.27
SPCS3-204ENST00000513139 NKG7Q16617 165 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms