RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 SPANXN2Q5MJ10 180 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 SAPCD1Q5SSQ6 148 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 FAM171A1Q5VUB5 890 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 RNLSQ5VYX0 342 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 C17orf99Q6UX52 265 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 SEM1Q6ZVN7 128 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 PATL1Q86TB9 770 aaKnown RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 LONP2Q86WA8 852 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 CDKL3Q8IVW4 592 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 CPXM2Q8N436 756 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 SNX31Q8N9S9 440 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 CPA5Q8WXQ8 436 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 ORAI1Q96D31 301 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 REXO5Q96IC2 774 aaKnown RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 THOC3Q96J01 351 aaKnown RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 NPY6RQ99463 290 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 FOXB1Q99853 325 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 SELENOSQ9BQE4 189 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 MESP1Q9BRJ9 268 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 HINT2Q9BX68 163 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 UBQLN3Q9H347 655 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 RIMS4Q9H426 269 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 DPEP2Q9H4A9 486 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 RANGRFQ9HD47 186 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 TRIM10Q9UDY6 481 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 DNAI1Q9UI46 699 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 SIT1Q9Y3P8 196 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 X6R8D5 127 aa6.13□□□□□ -1.43
TRAPPC11-209ENST00000512476 RGPD1P0DJD0 1748 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 KIF24Q5T7B8 1368 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 MAPK8IP3Q9UPT6 1336 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLIT3O75094 1523 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 A0A1W2PR48 441 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 TRPC5OSA6NMA1 111 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 C17orf100A8MU93 164 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 E9PLN8 166 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 HNF1AP20823 631 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 GPTP24298 496 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 TIA1P31483 386 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC6A12P48065 614 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 CTXN1P60606 82 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 CXCL9Q07325 125 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 ENPP2Q13822 863 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 FAM98BQ52LJ0 330 aaKnown RBP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 RUNDC3AQ59EK9 446 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM41BQ5BJD5 291 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 PHF19Q5T6S3 580 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 C16orf89Q6UX73 402 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 LEKR1Q6ZMV7 388 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 RNF144BQ7Z419 303 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 PRRT2Q7Z6L0 340 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 MAB21L3Q8N8X9 362 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 STKLD1Q8NE28 680 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 SCFD1Q8WVM8 642 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 RAB40AQ8WXH6 277 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 SMG7Q92540 1137 aaKnown RBP6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 SLC41A3Q96GZ6 507 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 MED30Q96HR3 178 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 VKORC1Q9BQB6 163 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 RTP3Q9BQQ7 232 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 XPNPEP3Q9NQH7 507 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 C8orf4Q9NR00 106 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 PTTG3PQ9NZH4 202 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF229Q9UJW7 825 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 ALS2Q96Q42 1657 aa6.12□□□□□ -1.43
TRAPPC11-209ENST00000512476 FAM177BA6PVY3 158 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TRIM77I1YAP6 450 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 NDUFS3O75489 264 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ZNF202O95125 648 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 NFICP08651 508 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ALOX5P09917 674 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 ANXA7P20073 488 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 OTX2P32243 289 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PBX1P40424 430 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMPOP42166 694 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 FOXL2P58012 376 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RPL15P61313 204 aaKnown RBP6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 RESTQ13127 1097 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CUL3Q13618 768 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 IL18Q14116 193 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PARP6Q2NL67 630 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 KLHL40Q2TBA0 621 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CBWD6Q4V339 395 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TEX44Q53QW1 395 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 CBWD3Q5JTY5 395 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 C6orf183Q5T699 404 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 STEAP3Q658P3 488 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 BLOC1S2Q6QNY1 142 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 PAGE2Q7Z2X7 111 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 AKAP14Q86UN6 197 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 TMIEQ8NEW7 156 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 OR10H4Q8NGA5 316 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 OR9K2Q8NGE7 335 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 UBASH3BQ8TF42 649 aa6.11□□□□□ -1.43
TRAPPC11-209ENST00000512476 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms