RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CA7P43166 264 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 CDKN1CP49918 316 aaPredicted RBP18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 VWA2Q5GFL6 755 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 LMNTD1Q8N9Z9 388 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 OR13C4Q8NGS5 318 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 PSMF1Q92530 271 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 LMF1Q96S06 567 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 NDC1Q9BTX1 674 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 WDR54Q9H977 334 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 SUCOQ9UBS9 1254 aaKnown RBP18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 IFRD1O00458 451 aaPredicted RBP18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 CCL22O00626 93 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 F10P00742 488 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 PRSS56P0CW18 603 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 ATP1B2P14415 290 aaPredicted RBP18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 SOX11P35716 441 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 CD151P48509 253 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 TNFSF10P50591 281 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 NFKBIBQ15653 356 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 IRAK1BP1Q5VVH5 260 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 SASS6Q6UVJ0 657 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 CDH24Q86UP0 819 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 ZNF567Q8N184 647 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 METTL27Q8N6F8 245 aaPredicted RBP18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 FCRL5Q96RD9 977 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 SLC26A1Q9H2B4 701 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 IRAK4Q9NWZ3 460 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 EURLQ9NYK6 297 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 PLAGL1Q9UM63 463 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 PLCL2Q9UPR0 1127 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 ABCA2Q9BZC7 2435 aa18.24■□□□□ 0.51
HMGCS1-206ENST00000511774 A0A1B0GTH6 734 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 A0A1B0GX78 115 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 KCNN4O15554 427 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 MED26O95402 600 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 PBX1P40424 430 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 MSLNQ13421 630 aaPredicted RBP18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 RBBP7Q16576 425 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 TMEM207Q6UWW9 146 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 HOOK3Q86VS8 718 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 RNF25Q96BH1 459 aaPredicted RBP18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 C8orf44Q96CB5 159 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 DCUN1D1Q96GG9 259 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 ZNF160Q9HCG1 818 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 CRLS1Q9UJA2 301 aa18.23■□□□□ 0.51
HMGCS1-206ENST00000511774 IGLV3-16A0A075B6K0 115 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 VSTM2BA6NLU5 285 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 ALBP02768 609 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 SERPING1P05155 500 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 SSTR2P30874 369 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 OR1D4P47884 311 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 ARG2P78540 354 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 MESDQ14696 234 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 TAF1AQ15573 450 aaPredicted RBP18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 SLC5A12Q1EHB4 618 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 MFSD7Q6UXD7 560 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 RPTNQ6XPR3 784 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 VSIG1Q86XK7 387 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 CLDN19Q8N6F1 224 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 APOL2Q9BQE5 337 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 FICDQ9BVA6 458 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 MRM3Q9HC36 420 aaKnown RBP18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 UVRAGQ9P2Y5 699 aa18.22■□□□□ 0.51
HMGCS1-206ENST00000511774 FBN3Q75N90 2809 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 KRT1P04264 644 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 CELA2AP08217 269 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 MAGP20916 626 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 ACADLP28330 430 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 SHMT2P34897 504 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 GTF3C1Q12789 2109 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 NCCRP1Q6ZVX7 275 aaPredicted RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 MCATQ8IVS2 390 aaKnown RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 BRIX1Q8TDN6 353 aaKnown RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 TFB1MQ8WVM0 346 aaKnown RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 COPS8Q99627 209 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 MAK16Q9BXY0 300 aaKnown RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 PTGFRNQ9P2B2 879 aa18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 KLHL8Q9P2G9 620 aaPredicted RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 BZW2Q9Y6E2 419 aaKnown RBP18.21■□□□□ 0.51
HMGCS1-206ENST00000511774 DSCR3O14972 297 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 HPP00738 406 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 HOXB4P17483 251 aaPredicted RBP18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 ZNF140P52738 457 aaPredicted RBP18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 PMP22Q01453 160 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 RPA4Q13156 261 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 MPP3Q13368 585 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 NR1I3Q14994 352 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 C3AR1Q16581 482 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 NAPRTQ6XQN6 538 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 PID1Q7Z2X4 250 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 PRSS58Q8IYP2 241 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 ADAMTS18Q8TE60 1221 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 SYN2Q92777 582 aaPredicted RBP18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 DLG3Q92796 817 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 SEMA3GQ9NS98 782 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 CUTCQ9NTM9 273 aa18.2■□□□□ 0.5
HMGCS1-206ENST00000511774 CHMP5Q9NZZ3 219 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms