RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	BIRC8	Q96P09	236 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	FMO2	Q99518	471 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	CCDC68	Q9H2F9	335 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	STN1	Q9H668	368 aa	Known RBP	10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	UCK1	Q9HA47	277 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	TBC1D29	Q9UFV1	150 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	FBXO5	Q9UKT4	447 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	CHMP2B	Q9UQN3	213 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	KCNK6	Q9Y257	313 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	PRKAB1	Q9Y478	270 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	HEBP2	Q9Y5Z4	205 aa		10.03	□□□□□ -0.8
PTPN20-222	ENST00000509774	ABCA2	Q9BZC7	2435 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ESYT3	A0FGR9	886 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	OR1I1	O60431	355 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	CLDN1	O95832	211 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	TUBB	P07437	444 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PRSS56	P0CW18	603 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PKM	P14618	531 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	NDUFS1	P28331	727 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	SKIV2L2	P42285	1042 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	SQSTM1	Q13501	440 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	NR1D2	Q14995	579 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ZNF658B	Q4V348	819 aa	Predicted RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	TEDDM1	Q5T9Z0	273 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PTRHD1	Q6GMV3	140 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	BORA	Q6PGQ7	559 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	DET1	Q7L5Y6	550 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ANKMY2	Q8IV38	441 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	CFAP206	Q8IYR0	622 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	CDKL2	Q92772	493 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PWWP2A	Q96N64	755 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	WDR83	Q9BRX9	315 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	SLC12A9	Q9BXP2	914 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	OSGEPL1	Q9H4B0	414 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	EPB41L1	Q9H4G0	881 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PPAN	Q9NQ55	473 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	IARS2	Q9NSE4	1012 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ZFAT	Q9P243	1243 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	GULP1	Q9UBP9	304 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	PLEKHM1	Q9Y4G2	1056 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	COLEC10	Q9Y6Z7	277 aa		10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.02	□□□□□ -0.81
PTPN20-222	ENST00000509774	UBA6	A0AVT1	1052 aa	Predicted RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	SLC5A10	A0PJK1	596 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	RHPN2P1	A8MT19	583 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PDZK1P1	A8MUH7	402 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774		B4DGG1	531 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	GOLGA8K	D6RF30	607 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	GOLGA8T	H3BQL2	631 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	IFRD1	O00458	451 aa	Predicted RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PLD2	O14939	933 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	GPC4	O75487	556 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	BANF1	O75531	89 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	SLCO2B1	O94956	709 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	AHSG	P02765	367 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	APOA4	P06727	396 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	RHOXF2B	P0C7M4	288 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	ERVK-10	P10266	1014 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	GNLY	P22749	145 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	MCM3	P25205	808 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	AOAH	P28039	575 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	STX2	P32856	288 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PHB	P35232	272 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	SLC1A2	P43004	574 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	MAPK9	P45984	424 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CARS	P49589	748 aa	Known RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	MLLT10	P55197	1068 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CTBP1	Q13363	440 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	BIRC2	Q13490	618 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	NAB1	Q13506	487 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	NFE2L1	Q14494	772 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	FASTKD3	Q14CZ7	662 aa	Known RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PLEKHS1	Q5SXH7	462 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	UGT3A1	Q6NUS8	523 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	GUSBP11	Q6P575	273 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	ZNF438	Q7Z4V0	828 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CCDC25	Q86WR0	208 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	ELMO1	Q92556	727 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	KCNJ9	Q92806	393 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	TMEM159	Q96B96	161 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CFAP36	Q96G28	342 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	DPYSL5	Q9BPU6	564 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	RHOXF2	Q9BQY4	288 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	TRIM56	Q9BRZ2	755 aa	Known RBP	10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	COG4	Q9H9E3	785 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PLAC1	Q9HBJ0	212 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PRDM8	Q9NQV8	689 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	POT1	Q9NUX5	634 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	LRIT1	Q9P2V4	623 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CPNE7	Q9UBL6	633 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	DNAJC16	Q9Y2G8	782 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	PRSS21	Q9Y6M0	314 aa		10.01	□□□□□ -0.81
PTPN20-222	ENST00000509774	CSMD2	Q7Z408	3487 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms