RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RORAP35398 523 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 PTGIRP43119 386 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 TERF1P54274 439 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 RRADP55042 308 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 SESN2P58004 480 aaPredicted RBP10.54□□□□□ -0.72
RNF4-212ENST00000509258 GSTM4Q03013 218 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 RPA4Q13156 261 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 NADK2Q4G0N4 442 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 ZNF385CQ66K41 422 aaPredicted RBP10.54□□□□□ -0.72
RNF4-212ENST00000509258 TTC27Q6P3X3 843 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 AFTPHQ6ULP2 937 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 FAM198BQ6UWH4 519 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 CES3Q6UWW8 571 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 ZNF662Q6ZS27 426 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 AMIGO1Q86WK6 493 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 LRRC8AQ8IWT6 810 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 PRELID2Q8N945 189 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 N4BP2L2Q92802 583 aaPredicted RBP10.54□□□□□ -0.72
RNF4-212ENST00000509258 CLIP3Q96DZ5 547 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 IL17FQ96PD4 163 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 OR2A14Q96R47 310 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 SLC29A3Q9BZD2 475 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 TSGA10Q9BZW7 698 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 MVB12BQ9H7P6 319 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 TREX1Q9NSU2 369 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 CUEDC1Q9NWM3 386 aaPredicted RBP10.54□□□□□ -0.72
RNF4-212ENST00000509258 SYBUQ9NX95 663 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 PADI2Q9Y2J8 665 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 KLHL20Q9Y2M5 609 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 MAP4K5Q9Y4K4 846 aa10.54□□□□□ -0.72
RNF4-212ENST00000509258 CNTRLQ7Z7A1 2325 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 C9J4A7 227 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 MEN1O00255 615 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 LIN7AO14910 233 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 KDM1AO60341 852 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 DPM1O60762 260 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 CEACAM4O75871 244 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TMEM63AO94886 807 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 CHRM5P08912 532 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 CD63P08962 238 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 CYP2A7P20853 494 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 AGXTP21549 392 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 MGAT1P26572 445 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 CCL11P51671 97 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TRIP13Q15645 432 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 CCNG2Q16589 344 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 PTCHD3Q3KNS1 767 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 CCSMST1Q4G0I0 132 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 ANKRD22Q5VYY1 191 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 DRICH1Q6PGQ1 229 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 SPESP1Q6UW49 350 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 RAB43Q86YS6 212 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 GPR135Q8IZ08 494 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 DSELQ8IZU8 1212 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TXLNBQ8N3L3 684 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 MPP5Q8N3R9 675 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 C2orf73Q8N5S3 287 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 ENDOVQ8N8Q3 282 aaKnown RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 TMEM102Q8N9M5 508 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 LINC01555Q8NAE3 123 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 OR6P1Q8NGX9 317 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 OR4L1Q8NH43 312 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 ADAMTS17Q8TE56 1095 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 IP6K3Q96PC2 410 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 ALS2CR12Q96Q35 445 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 DPH2Q9BQC3 489 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 AP1M1Q9BXS5 423 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 NLNQ9BYT8 704 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 FRMD8P1Q9BZ68 369 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 SPRTNQ9H040 489 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 PCMTD2Q9NV79 361 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 PAK5Q9P286 719 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TCFL5Q9UL49 500 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 RIMKLBQ9ULI2 386 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TTC7AQ9ULT0 858 aaPredicted RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 ASF1AQ9Y294 204 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 TDRKHQ9Y2W6 561 aaKnown RBP10.53□□□□□ -0.72
RNF4-212ENST00000509258 DOPEY1Q5JWR5 2465 aa10.53□□□□□ -0.72
RNF4-212ENST00000509258 SCN2AQ99250 2005 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 HIVEP3Q5T1R4 2406 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 C2orf74A8MZ97 194 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 GOLGA8KD6RF30 607 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 E7EQ34 232 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 E7EVH7 732 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 GOLGA8TH3BQL2 631 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 CEP104O60308 925 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 NRP2O60462 931 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 CNOT3O75175 753 aaKnown RBP10.52□□□□□ -0.73
RNF4-212ENST00000509258 AVILO75366 819 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 GPC4O75487 556 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 IGHEP01854 428 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 FTH1P02794 183 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 CCDC175P0C221 793 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 MSL3P1P0C860 447 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 ATXN8OSP0DMR3 200 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 PKLRP30613 574 aa10.52□□□□□ -0.73
RNF4-212ENST00000509258 VPS41P49754 854 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms