RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PDHA1P08559 390 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 KRT7P08729 469 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ZNF883P0CG24 379 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 CCNB1P14635 433 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 SERPINA4P29622 427 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 NUDT1P36639 197 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 GARSP41250 739 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 ARHGAP25P42331 645 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 GRK6P43250 576 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 MMP13P45452 471 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RXRGP48443 463 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 LSSP48449 732 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 MARCKSL1P49006 195 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ARRB1P49407 418 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 CDKN1CP49918 316 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 CCT8P50990 548 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RENBPP51606 427 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ZNF135P52742 658 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 NAP1L1P55209 391 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 IL2P60568 153 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 NSUN2Q08J23 767 aaKnown RBP eCLIP4.52□□□□□ -1.69
NUP54-206ENST00000508465 GALNT2Q10471 571 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 AP1B1Q10567 949 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TRAF2Q12933 501 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 EIF2B5Q13144 721 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 PDE1CQ14123 709 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 ZNF235Q14590 738 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RFTN1Q14699 578 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 ACOX1Q15067 660 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PAFAH1B3Q15102 231 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 PDK2Q15119 407 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 IRF4Q15306 451 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 SPA17Q15506 151 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TMEM52BQ4KMG9 183 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ODF2Q5BJF6 829 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 KCTD16Q68DU8 428 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 KIAA1161Q6NSJ0 714 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ERAP2Q6P179 960 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 DHRS13Q6UX07 377 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 MFSD7Q6UXD7 560 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RAD9BQ6WBX8 426 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ABI3BPQ7Z7G0 1075 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TSPAN33Q86UF1 283 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 IQCHQ86VS3 1027 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 MAP7D3Q8IWC1 876 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 CCDC170Q8IYT3 715 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TEX26Q8N6G2 289 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PLD5Q8N7P1 536 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ACRBPQ8NEB7 543 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 GPR156Q8NFN8 814 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 HCAR2Q8TDS4 363 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 LMX1AQ8TE12 382 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 NSMCE1Q8WV22 266 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RFFLQ8WZ73 363 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 DDB2Q92466 427 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 KRT35Q92764 455 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TSACCQ96A04 125 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 RAB7BQ96AH8 199 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 CNDP2Q96KP4 475 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 ZNF599Q96NL3 588 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TSGA13Q96PP4 275 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 LENG8Q96PV6 779 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 PSKH2Q96QS6 385 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PANX2Q96RD6 677 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 NUDCD1Q96RS6 583 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 SEMA3CQ99985 751 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 DESI2Q9BSY9 194 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 SUDS3Q9H7L9 328 aaPredicted RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 ERVMER34-1Q9H9K5 563 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 SEPT10Q9P0V9 454 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TRIM10Q9UDY6 481 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 APOBEC2Q9Y235 224 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 CHKBQ9Y259 395 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 ATP8A1Q9Y2Q0 1164 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 PCDHGB2Q9Y5G2 931 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 RAI2Q9Y5P3 530 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 TDRD6O60522 2096 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 TMEM131Q92545 1883 aa4.52□□□□□ -1.69
NUP54-206ENST00000508465 NYNRINQ9P2P1 1898 aaKnown RBP4.52□□□□□ -1.69
NUP54-206ENST00000508465 CHD5Q8TDI0 1954 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CHD8Q9HCK8 2581 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TRGV11A0A075B6L2 103 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 SPTY2D1-AS1A0A0U1RR47 76 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CPED1A4D0V7 1026 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GOLGA6CA6NDK9 693 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 GOLGA6BA6NDN3 693 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 TMEM202A6NGA9 273 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 NPIPB15A6NHN6 443 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 YY2O15391 372 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 FLRT2O43155 660 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 HTRA2O43464 458 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 TNFSF14O43557 240 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 CST8O60676 142 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 PIAS2O75928 621 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 RECQL5O94762 991 aaPredicted RBP4.51□□□□□ -1.69
NUP54-206ENST00000508465 MTA2O94776 668 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 LCA5LO95447 670 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 MMP2P08253 660 aa4.51□□□□□ -1.69
NUP54-206ENST00000508465 ALPIP09923 528 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms