RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 PIWIL4Q7Z3Z4 852 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR9A1PQ8NGU1 263 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PATE1Q8WXA2 126 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TFGQ92734 400 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 LINGO1Q96FE5 620 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 APOPT1Q96IL0 206 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ELMO2Q96JJ3 720 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PITHD1Q9GZP4 211 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TRIT1Q9H3H1 467 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 STOX2Q9P2F5 926 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 COLEC10Q9Y6Z7 277 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 KRT37O76014 449 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 DUSP3P51452 185 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 KIR2DS3Q14952 304 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PLA2G4EQ3MJ16 856 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 GGTA1PQ4G0N0 100 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CMC1Q7Z7K0 106 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ADAMTSL2Q86TH1 951 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CHCHD4Q8N4Q1 142 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 SETD7Q8WTS6 366 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 ALKBH8Q96BT7 664 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TM4SF19Q96DZ7 209 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CNDP2Q96KP4 475 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR4K3Q96R72 315 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CPAMD8Q8IZJ3 1885 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRAMEF33A0A0G2JMD5 474 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TRIM49D1C9J1S8 452 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 BTN3A1O00481 513 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 SH3BP5O60239 455 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 DXOO77932 396 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 LDOC1O95751 146 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 RPN2P04844 631 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 SHMT2P34897 504 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 RPIAP49247 311 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 RAB28P51157 221 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 MAZP56270 477 aaKnown RBP8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OTOAQ7RTW8 1153 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMPRSS7Q7RTY8 843 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2A1Q8NGT9 310 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2W6PQ8NHA6 318 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCDC74AQ96AQ1 378 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 DCDC2Q9UHG0 476 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 PLLPQ9Y342 182 aa8.03□□□□□ -1.12
CDC42SE2-208ENST00000505065 A0A096LPK6 155 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 E7ENX8 843 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 BTN3A3O00478 584 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCND1P24385 295 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 PGGT1BP53609 377 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 IL9RQ01113 521 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TAP2Q03519 686 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TGFBIQ15582 683 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TTMPQ5BVD1 217 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 PPM1JQ5JR12 505 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 FAM129CQ86XR2 697 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 GATAD2AQ86YP4 633 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 SPDYE1Q8NFV5 336 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 IFI44Q8TCB0 444 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF480Q8WV37 535 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM159Q96B96 161 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 MRPL57Q9BQC6 102 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ASCC3Q8N3C0 2202 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CDC7O00311 574 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 E2F3O00716 465 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 KCNK5O95279 499 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 INHBAP08476 426 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC35G4P0C7Q5 338 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 LSSP48449 732 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 E2F1Q01094 437 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 HHEXQ03014 270 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CES4AQ5XG92 561 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC30A9Q6PML9 568 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TAF8Q7Z7C8 310 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 EID2Q8N6I1 236 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 MAGEC3Q8TD91 643 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 RSC1A1Q92681 617 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ABCG4Q9H172 646 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 LRRN3Q9H3W5 708 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ACOT9Q9Y305 439 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR2A25A4D2G3 310 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR52A4PA6NMU1 304 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 D6RAR5 112 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TERTO14746 1132 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZBTB14O43829 449 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 UGDHO60701 494 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 RFPL3O75679 317 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CHRM5P08912 532 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CTSEP14091 401 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ABCG1P45844 678 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ALDH18A1P54886 795 aaKnown RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 BMPR2Q13873 1038 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCDC153Q494R4 210 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 AASDHQ4L235 1098 aaPredicted RBP8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ANKS6Q68DC2 871 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM71Q6P5X7 295 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZYG11AQ6WRX3 759 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATG14Q6ZNE5 492 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 D2HGDHQ8N465 521 aa8.02□□□□□ -1.13
CDC42SE2-208ENST00000505065 NXNL1Q96CM4 212 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms