RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 A0A1B0GTL3 188 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 MEN1O00255 615 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 IFRD1O00458 451 aaPredicted RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 CPNE3O75131 537 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 CNOT3O75175 753 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 APRTP07741 180 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 CHRM5P08912 532 aaPredicted RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 CCNYL3P0C7X3 344 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 STIP1P31948 543 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 PMS2P54278 862 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 CCZ1BP86790 482 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 CCZ1P86791 482 aaPredicted RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 MC1RQ01726 317 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 UGT8Q16880 541 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 CCSMST1Q4G0I0 132 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 SEL1L2Q5TEA6 688 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 SPESP1Q6UW49 350 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 PPP1R21Q6ZMI0 780 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 LINC00523Q86TU6 105 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 ENDOVQ8N8Q3 282 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 MR1Q95460 341 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 AP1M1Q9BXS5 423 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 SPRTNQ9H040 489 aaPredicted RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 LATS2Q9NRM7 1088 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 TREX1Q9NSU2 369 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 KCND3Q9UK17 655 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 RUVBL2Q9Y230 463 aaKnown RBP12.69□□□□□ -0.38
DDX41-204ENST00000504807 ASF1AQ9Y294 204 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 PCDHB3Q9Y5E6 796 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 PIKFYVEQ9Y2I7 2098 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 SPG11Q96JI7 2443 aa12.69□□□□□ -0.38
DDX41-204ENST00000504807 SPTBP11277 2137 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 ABCA2Q9BZC7 2435 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 HEATR9A2RTY3 570 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 ERI2A8K979 691 aaKnown RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 MASP2O00187 686 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 LIN7AO14910 233 aaPredicted RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 PSMD3O43242 534 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 NRP2O60462 931 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 MT-ND3P03897 115 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 ADRA1DP25100 572 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 NMBRP28336 390 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 CXCR5P32302 372 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 FDFT1P37268 417 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 PTGIRP43119 386 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 TERF1P54274 439 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 ITGA1P56199 1179 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 SESN2P58004 480 aaPredicted RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 RPS6KA1Q15418 735 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 PRR30Q53SZ7 412 aaPredicted RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 IZUMO3Q5VZ72 239 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 TTC27Q6P3X3 843 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 AFTPHQ6ULP2 937 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 CES3Q6UWW8 571 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 BPHLQ86WA6 291 aaPredicted RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 SLC34A3Q8N130 599 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 CARFQ8N187 725 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 C2orf73Q8N5S3 287 aaPredicted RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 C19orf47Q8N9M1 422 aaKnown RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 OR4L1Q8NH43 312 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 OR5K2Q8NHB8 316 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 P2RY12Q9H244 342 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 ITGB1BP2Q9UKP3 347 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 POLHQ9Y253 713 aa12.68□□□□□ -0.38
DDX41-204ENST00000504807 FARSAQ9Y285 508 aaKnown RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 TDRKHQ9Y2W6 561 aaKnown RBP12.68□□□□□ -0.38
DDX41-204ENST00000504807 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 C2orf74A8MZ97 194 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 ZNF749O43361 778 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 GPC4O75487 556 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 ZNF189O75820 626 aaPredicted RBP12.67□□□□□ -0.38
DDX41-204ENST00000504807 FGGP02679 453 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 FTH1P02794 183 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 MSL3P1P0C860 447 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 CBSLP0DN79 551 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 ITGAXP20702 1163 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 PKLRP30613 574 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 CBSP35520 551 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 PRKAA1Q13131 559 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 CCNG2Q16589 344 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 CTSL3PQ5NE16 218 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 ANKRD22Q5VYY1 191 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
DDX41-204ENST00000504807 SYTL1Q8IYJ3 562 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 SLC22A15Q8IZD6 547 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 MPP5Q8N3R9 675 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 DTWD1Q8N5C7 304 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 PRELID2Q8N945 189 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 OR6P1Q8NGX9 317 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 C5orf34Q96MH7 638 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 LRFN5Q96NI6 719 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 GPR87Q9BY21 358 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 GALPQ9UBC7 116 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms