RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 JUPP14923 745 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 GCAP28676 217 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 CRABP2P29373 138 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 CCKBRP32239 447 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 SHMT2P34897 504 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 HSD17B3P37058 310 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 CAPZBP47756 277 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 CSRP3P50461 194 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ZFP36L1Q07352 338 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ZNF460Q14592 562 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 MAP9Q49MG5 647 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 MROH9Q5TGP6 573 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 TMPRSS9Q7Z410 1059 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 AMIGO1Q86WK6 493 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 OOSP2Q86WS3 158 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 MREGQ8N565 214 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 NCSTNQ92542 709 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 TMEM74Q96NL1 305 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 RAB11FIP5Q9BXF6 653 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC12A9Q9BXP2 914 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 PPCSQ9HAB8 311 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 GPAMQ9HCL2 828 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 HRASLS2Q9NWW9 162 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 OR6C2Q9NZP2 312 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 ICKQ9UPZ9 632 aa11.55□□□□□ -0.56
PDLIM5-208ENST00000504489 IGHV5-10-1A0A0J9YXX1 117 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 OR6C74A6NCV1 312 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 MYO1CO00159 1063 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 MATN2O00339 956 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 RASGRF2O14827 1237 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 PHGDHO43175 533 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 HYAL3O43820 417 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 CSO75390 466 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ADRB1P08588 477 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 MAP4P27816 1152 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC26A3P40879 764 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 BDKRB1P46663 353 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 PPM1FP49593 454 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 RAB28P51157 221 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 PDX1P52945 283 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 INHBCP55103 352 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 CLDN6P56747 220 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 FOXC1Q12948 553 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 TARDBPQ13148 414 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 SP140Q13342 867 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 BMPR2Q13873 1038 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ISXQ2M1V0 245 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 CCSMST1Q4G0I0 132 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 LGSNQ5TDP6 509 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 UBE2R2Q712K3 238 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 RAB42Q8N4Z0 105 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 OR9A1PQ8NGU1 263 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 HMGCLL1Q8TB92 370 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 MCOLN3Q8TDD5 553 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ANKRD49Q8WVL7 239 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 DLG3Q92796 817 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ISL2Q96A47 359 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ZDHHC12Q96GR4 267 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 UBXN10Q96LJ8 280 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 CD180Q99467 661 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 DERL2Q9GZP9 239 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 PARVBQ9HBI1 364 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 SPATA7Q9P0W8 599 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 ENTPD2Q9Y5L3 495 aa11.54□□□□□ -0.56
PDLIM5-208ENST00000504489 BTN3A3O00478 584 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 BTN3A1O00481 513 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CAPN5O15484 640 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 KRT37O76014 449 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ALDOAP04075 364 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SHBGP04278 402 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SNRPAP09012 282 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 NUDT17P0C025 328 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SLC35E2BP0CK96 405 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CCDC166P0CW27 439 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 THRAP10827 490 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ERGP11308 486 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 POLR2CP19387 275 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CYP2A7P20853 494 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TYK2P29597 1187 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PKLRP30613 574 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 HSD17B2P37059 387 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 MAGEA12P43365 314 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 SERPINB8P50452 374 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ARHGAP19Q14CB8 494 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 RASA2Q15283 850 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 CYP2A13Q16696 494 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ANKS6Q68DC2 871 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 ARMC6Q6NXE6 501 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 TIFABQ6ZNK6 161 aa11.53□□□□□ -0.56
PDLIM5-208ENST00000504489 RAPH1Q70E73 1250 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms