RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 FAM221AA4D161 298 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 LRRC10BA6NIK2 292 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 MAP2K7O14733 419 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 PPP1R12AO14974 1030 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 STX7O15400 261 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 SGTAO43765 313 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 EPOP01588 193 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 ACPPP15309 386 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 FDXRP22570 491 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 SOX11P35716 441 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 CARSP49589 748 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 PRLHRP49683 370 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 CSNK1G2P78368 415 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 SRSF11Q05519 484 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 BOP1Q14137 746 aaKnown RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 PDK1Q15118 436 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 TEX44Q53QW1 395 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 FAM20CQ8IXL6 584 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 SLC25A41Q8N5S1 370 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 ADAMTS18Q8TE60 1221 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 TFGQ92734 400 aaPredicted RBP15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 MAGED4Q96JG8 741 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 CRB3Q9BUF7 120 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 EURLQ9NYK6 297 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 FAM153AQ9UHL3 310 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 FBN3Q75N90 2809 aa15.17■□□□□ 0.02
PDLIM7-210ENST00000503827 DSCR3O14972 297 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 CHRM5P08912 532 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 CHRNA4P43681 627 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 GCGRP47871 477 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 WNT3AP56704 352 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 FANCCQ00597 558 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 UNC5AQ6ZN44 842 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 COX15Q7KZN9 410 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 BRIX1Q8TDN6 353 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 SPHK1Q9NYA1 384 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 CTSFQ9UBX1 484 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 MEMO1Q9Y316 297 aa15.16■□□□□ 0.02
PDLIM7-210ENST00000503827 NSG1A0A0A6YYJ2 146 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 CFAP99D6REC4 459 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 SRP72O76094 671 aaKnown RBP15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 F10P00742 488 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 PRR35P0CG20 571 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 PDHA2P29803 388 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 NSG1P42857 185 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 PTPRCAPQ14761 206 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 YOD1Q5VVQ6 348 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 KDELC1Q6UW63 502 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 SIRT6Q8N6T7 355 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 ACBD4Q8NC06 268 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 PSMF1Q92530 271 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 VPS37BQ9H9H4 285 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 CUTCQ9NTM9 273 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 IL1RAPL1Q9NZN1 696 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 CRLS1Q9UJA2 301 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 PCDHGB6Q9Y5F9 930 aa15.15■□□□□ 0.02
PDLIM7-210ENST00000503827 GTF3C1Q12789 2109 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 VSTM2BA6NLU5 285 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 ISM1B1AKI9 464 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 PRAMEF2O60811 474 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 WFS1O76024 890 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 SKILP12757 684 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 ATP1B2P14415 290 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 KDELR1P24390 212 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 RAB28P51157 221 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 RPA4Q13156 261 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 SLC1A5Q15758 541 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 E4F1Q66K89 784 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 MCATQ8IVS2 390 aaKnown RBP15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 CHDHQ8NE62 594 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 FLVCR1-AS1Q8TAF5 88 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 HEXDCQ8WVB3 486 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 OR6C2Q9NZP2 312 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 ZNF835Q9Y2P0 537 aa15.14■□□□□ 0.01
PDLIM7-210ENST00000503827 APOL1O14791 398 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 BMP10O95393 424 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 MLYCDO95822 493 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 WDPCPO95876 746 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 CYP1A2P05177 515 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 SERPINA7P05543 415 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 PTPN3P26045 913 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 OR1D4P47884 311 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 TAS2R40P59535 323 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 PPP2R2AP63151 447 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 OCA2Q04671 838 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 CACNG1Q06432 222 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 KLC1Q07866 573 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 GRM7Q14831 915 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 Q6ZPB1 254 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 NDUFAF7Q7L592 441 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 NLRP9Q7RTR0 991 aa15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 APTXQ7Z2E3 356 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-210ENST00000503827 CPNE8Q86YQ8 564 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms